Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 PCED1CP-201ENST00000419887 785 ntBASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 AC011558.1-201ENST00000623459 338 ntBASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.43■□□□□ 0.22
RAI1Q7Z5J4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 KRT18P38-201ENST00000449496 1282 ntBASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 AL512604.3-201ENST00000569583 964 ntBASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAI1Q7Z5J4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AC092647.4-201ENST00000457211 535 ntBASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AL671277.2-201ENST00000458060 996 ntBASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 PRSS44-201ENST00000515154 1146 ntBASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 NEK4P2-201ENST00000580004 1012 ntBASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 KRT8P11-201ENST00000409686 1436 ntBASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.41■□□□□ 0.22
RAI1Q7Z5J4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms