Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC073912.3-201ENST00000624414 853 ntBASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 AC004408.2-201ENST00000623613 2777 ntBASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 RBM17P1-201ENST00000453646 1190 ntBASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 AC116562.2-201ENST00000507042 360 ntBASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 AC131212.4-201ENST00000623606 975 ntBASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.04■□□□□ 0.8
RFWD3Q6PCD5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 MESTP1-201ENST00000404287 994 ntBASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 AC011506.1-201ENST00000474329 610 ntBASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 AC079598.2-202ENST00000546624 1451 ntBASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFWD3Q6PCD5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 AP000525.1-201ENST00000608286 694 ntBASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFWD3Q6PCD5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RFWD3Q6PCD5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFWD3Q6PCD5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFWD3Q6PCD5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFWD3Q6PCD5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
RFWD3Q6PCD5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFWD3Q6PCD5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 AC125437.2-201ENST00000625180 2167 ntBASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 MIR6786-201ENST00000616843 113 ntBASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 TNXA-203ENST00000507684 2038 ntBASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms