Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 KRASP1-201ENST00000407852 552 ntBASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 CD99P1-205ENST00000527459 561 ntBASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 AC006058.3-201ENST00000606217 1069 ntBASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 HLA-A-209ENST00000638375 975 ntBASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ZNF549Q6P9A3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF549Q6P9A3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 RN7SL471P-201ENST00000580476 299 ntBASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 AC124016.1-201ENST00000609552 612 ntBASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF549Q6P9A3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 AC004264.1-201ENST00000608354 794 ntBASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 AC093503.3-201ENST00000624917 2352 ntBASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 RNF165-205ENST00000588679 2904 ntBASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ZNF549Q6P9A3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 AC239809.2-201ENST00000415381 517 ntBASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 FP475955.4-201ENST00000623131 1990 ntBASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF549Q6P9A3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ZNF549Q6P9A3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ZNF549Q6P9A3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF549Q6P9A3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF549Q6P9A3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF549Q6P9A3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms