Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 TSPY23P-201ENST00000440136 739 ntBASIC16.91■□□□□ 0.3
FREM1Q5H8C1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.91■□□□□ 0.3
FREM1Q5H8C1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 LINC01568-207ENST00000641790 1380 ntBASIC16.91■□□□□ 0.3
FREM1Q5H8C1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 KRT8P11-201ENST00000409686 1436 ntBASIC16.91■□□□□ 0.3
FREM1Q5H8C1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 MMP23A-201ENST00000234610 1017 ntBASIC16.91■□□□□ 0.3
FREM1Q5H8C1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 ECEL1P2-202ENST00000465689 757 ntBASIC16.91■□□□□ 0.3
FREM1Q5H8C1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FREM1Q5H8C1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 KRT18P22-201ENST00000402024 1347 ntBASIC16.9■□□□□ 0.3
FREM1Q5H8C1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM1Q5H8C1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
FREM1Q5H8C1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.89■□□□□ 0.3
FREM1Q5H8C1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FREM1Q5H8C1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.89■□□□□ 0.3
FREM1Q5H8C1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.89■□□□□ 0.3
FREM1Q5H8C1 AC130371.2-201ENST00000619443 611 ntBASIC16.89■□□□□ 0.3
FREM1Q5H8C1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 TEX21P-204ENST00000641479 1693 ntBASIC16.89■□□□□ 0.29
FREM1Q5H8C1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 SLC25A3P1-201ENST00000443844 931 ntBASIC16.89■□□□□ 0.29
FREM1Q5H8C1 AP005242.2-201ENST00000580065 1175 ntBASIC16.89■□□□□ 0.29
FREM1Q5H8C1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.89■□□□□ 0.29
FREM1Q5H8C1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM1Q5H8C1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM1Q5H8C1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms