Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 AP000974.1-201ENST00000623909 2387 ntBASIC20.26■□□□□ 0.83
PTPN20Q4JDL3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 AC098818.2-201ENST00000564925 2320 ntBASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 CR392000.1-201ENST00000624770 1228 ntBASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 KRT16P1-201ENST00000399124 1418 ntBASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN20Q4JDL3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 AC018445.3-201ENST00000624177 1945 ntBASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 AC131212.4-201ENST00000623606 975 ntBASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN20Q4JDL3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 IRX1P1-201ENST00000438849 1838 ntBASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 RPS2P55-201ENST00000397318 883 ntBASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 AC107956.1-201ENST00000494359 873 ntBASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PTPN20Q4JDL3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 AL135905.2-201ENST00000584934 1404 ntBASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN20Q4JDL3 FAM197Y1-201ENST00000421178 764 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms