Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 WWOX-216ENST00000569818 525 ntBASIC23.09■■□□□ 1.29
PDS5AQ29RF7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 AC139887.4-201ENST00000607877 719 ntBASIC23.08■■□□□ 1.29
PDS5AQ29RF7 MYC-208ENST00000641036 567 ntBASIC23.08■■□□□ 1.29
PDS5AQ29RF7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.08■■□□□ 1.29
PDS5AQ29RF7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.08■■□□□ 1.29
PDS5AQ29RF7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDS5AQ29RF7 AC073130.3-201ENST00000624389 2278 ntBASIC23.08■■□□□ 1.28
PDS5AQ29RF7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDS5AQ29RF7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDS5AQ29RF7 RNF152P1-201ENST00000397754 604 ntBASIC23.08■■□□□ 1.28
PDS5AQ29RF7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.08■■□□□ 1.28
PDS5AQ29RF7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.08■■□□□ 1.28
PDS5AQ29RF7 MIR4674-201ENST00000582457 87 ntBASIC23.08■■□□□ 1.28
PDS5AQ29RF7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
PDS5AQ29RF7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 KRT8P45-201ENST00000414328 1447 ntBASIC23.07■■□□□ 1.28
PDS5AQ29RF7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 NEK4P2-201ENST00000580004 1012 ntBASIC23.07■■□□□ 1.28
PDS5AQ29RF7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.07■■□□□ 1.28
PDS5AQ29RF7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 NTF6B-201ENST00000591913 560 ntBASIC23.06■■□□□ 1.28
PDS5AQ29RF7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 AL031432.5-201ENST00000641059 760 ntBASIC23.06■■□□□ 1.28
PDS5AQ29RF7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDS5AQ29RF7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDS5AQ29RF7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms