Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST1H3AP68431 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H3AP68431 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 FP475955.4-201ENST00000623131 1990 ntBASIC16.8■□□□□ 0.28
HIST1H3AP68431 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H3AP68431 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H3AP68431 IRX1P1-201ENST00000438849 1838 ntBASIC16.8■□□□□ 0.28
HIST1H3AP68431 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 AC087289.5-201ENST00000586076 3175 ntBASIC16.79■□□□□ 0.28
HIST1H3AP68431 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST1H3AP68431 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 FEM1AP3-201ENST00000403722 1741 ntBASIC16.79■□□□□ 0.28
HIST1H3AP68431 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H3AP68431 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HIST1H3AP68431 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
HIST1H3AP68431 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.78■□□□□ 0.28
HIST1H3AP68431 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST1H3AP68431 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms