Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.64■■□□□ 1.54
EIF4A1P60842 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC24.64■■□□□ 1.53
EIF4A1P60842 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.64■■□□□ 1.53
EIF4A1P60842 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.64■■□□□ 1.53
EIF4A1P60842 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.64■■□□□ 1.53
EIF4A1P60842 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
EIF4A1P60842 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
EIF4A1P60842 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.64■■□□□ 1.53
EIF4A1P60842 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.64■■□□□ 1.53
EIF4A1P60842 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
EIF4A1P60842 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 KRT8P45-201ENST00000414328 1447 ntBASIC24.63■■□□□ 1.53
EIF4A1P60842 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24.63■■□□□ 1.53
EIF4A1P60842 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.63■■□□□ 1.53
EIF4A1P60842 AC063952.2-201ENST00000498792 1227 ntBASIC24.63■■□□□ 1.53
EIF4A1P60842 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 MIR4674-201ENST00000582457 87 ntBASIC24.63■■□□□ 1.53
EIF4A1P60842 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.63■■□□□ 1.53
EIF4A1P60842 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.63■■□□□ 1.53
EIF4A1P60842 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
EIF4A1P60842 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.63■■□□□ 1.53
EIF4A1P60842 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.62■■□□□ 1.53
EIF4A1P60842 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.62■■□□□ 1.53
EIF4A1P60842 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.62■■□□□ 1.53
EIF4A1P60842 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.62■■□□□ 1.53
EIF4A1P60842 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.62■■□□□ 1.53
EIF4A1P60842 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 YBX1P2-201ENST00000489612 999 ntBASIC24.62■■□□□ 1.53
EIF4A1P60842 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.62■■□□□ 1.53
EIF4A1P60842 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC24.62■■□□□ 1.53
EIF4A1P60842 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.62■■□□□ 1.53
EIF4A1P60842 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
EIF4A1P60842 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.62■■□□□ 1.53
EIF4A1P60842 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.62■■□□□ 1.53
EIF4A1P60842 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
EIF4A1P60842 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
EIF4A1P60842 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.61■■□□□ 1.53
EIF4A1P60842 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
EIF4A1P60842 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 GOLGA6L5P-202ENST00000515341 1828 ntBASIC24.61■■□□□ 1.53
EIF4A1P60842 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.61■■□□□ 1.53
EIF4A1P60842 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.61■■□□□ 1.53
EIF4A1P60842 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.61■■□□□ 1.53
EIF4A1P60842 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
EIF4A1P60842 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
EIF4A1P60842 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
EIF4A1P60842 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.6■■□□□ 1.53
EIF4A1P60842 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC24.6■■□□□ 1.53
EIF4A1P60842 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.6■■□□□ 1.53
EIF4A1P60842 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.6■■□□□ 1.53
EIF4A1P60842 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.6■■□□□ 1.53
EIF4A1P60842 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.6■■□□□ 1.53
EIF4A1P60842 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.6■■□□□ 1.53
EIF4A1P60842 COX11P1-201ENST00000489116 835 ntBASIC24.6■■□□□ 1.53
EIF4A1P60842 AC022616.7-201ENST00000525383 220 ntBASIC24.6■■□□□ 1.53
EIF4A1P60842 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.6■■□□□ 1.53
EIF4A1P60842 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.6■■□□□ 1.53
EIF4A1P60842 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 AC008622.2-201ENST00000617006 1229 ntBASIC24.6■■□□□ 1.53
EIF4A1P60842 AC011558.1-201ENST00000623459 338 ntBASIC24.6■■□□□ 1.53
EIF4A1P60842 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.6■■□□□ 1.53
EIF4A1P60842 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
EIF4A1P60842 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
EIF4A1P60842 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
EIF4A1P60842 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
EIF4A1P60842 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
EIF4A1P60842 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms