Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CRYGFP-201ENST00000418459 633 ntBASIC16.88■□□□□ 0.29
FOXG1P55316 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXG1P55316 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXG1P55316 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.88■□□□□ 0.29
FOXG1P55316 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.88■□□□□ 0.29
FOXG1P55316 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXG1P55316 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXG1P55316 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXG1P55316 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXG1P55316 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXG1P55316 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FOXG1P55316 MMP23A-201ENST00000234610 1017 ntBASIC16.87■□□□□ 0.29
FOXG1P55316 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXG1P55316 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXG1P55316 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.87■□□□□ 0.29
FOXG1P55316 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXG1P55316 FITM1-202ENST00000559294 800 ntBASIC16.87■□□□□ 0.29
FOXG1P55316 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXG1P55316 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
FOXG1P55316 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
FOXG1P55316 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXG1P55316 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
FOXG1P55316 KRT8P11-201ENST00000409686 1436 ntBASIC16.87■□□□□ 0.29
FOXG1P55316 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXG1P55316 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXG1P55316 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXG1P55316 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXG1P55316 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXG1P55316 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXG1P55316 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
FOXG1P55316 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
FOXG1P55316 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXG1P55316 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXG1P55316 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXG1P55316 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXG1P55316 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXG1P55316 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXG1P55316 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
FOXG1P55316 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXG1P55316 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
FOXG1P55316 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FOXG1P55316 TEX21P-204ENST00000641479 1693 ntBASIC16.85■□□□□ 0.29
FOXG1P55316 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXG1P55316 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
FOXG1P55316 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
FOXG1P55316 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FOXG1P55316 AC211429.1-201ENST00000415277 523 ntBASIC16.85■□□□□ 0.29
FOXG1P55316 TSPY23P-201ENST00000440136 739 ntBASIC16.85■□□□□ 0.29
FOXG1P55316 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXG1P55316 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXG1P55316 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXG1P55316 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
FOXG1P55316 DGCR10-201ENST00000609839 495 ntBASIC16.85■□□□□ 0.29
FOXG1P55316 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXG1P55316 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms