Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 UNC93B2-201ENST00000285383 730 ntBASIC21.08■□□□□ 0.97
NCKAP1LP55160 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCKAP1LP55160 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NCKAP1LP55160 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
NCKAP1LP55160 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NCKAP1LP55160 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.08■□□□□ 0.97
NCKAP1LP55160 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.08■□□□□ 0.97
NCKAP1LP55160 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.08■□□□□ 0.96
NCKAP1LP55160 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.08■□□□□ 0.96
NCKAP1LP55160 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NCKAP1LP55160 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.08■□□□□ 0.96
NCKAP1LP55160 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NCKAP1LP55160 AC096733.2-201ENST00000609937 1394 ntBASIC21.08■□□□□ 0.96
NCKAP1LP55160 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKAP1LP55160 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.07■□□□□ 0.96
NCKAP1LP55160 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NCKAP1LP55160 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NCKAP1LP55160 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NCKAP1LP55160 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKAP1LP55160 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKAP1LP55160 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NCKAP1LP55160 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKAP1LP55160 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
NCKAP1LP55160 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKAP1LP55160 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
NCKAP1LP55160 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.06■□□□□ 0.96
NCKAP1LP55160 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.06■□□□□ 0.96
NCKAP1LP55160 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.06■□□□□ 0.96
NCKAP1LP55160 PRSS44-201ENST00000515154 1146 ntBASIC21.06■□□□□ 0.96
NCKAP1LP55160 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.06■□□□□ 0.96
NCKAP1LP55160 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.05■□□□□ 0.96
NCKAP1LP55160 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.05■□□□□ 0.96
NCKAP1LP55160 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.05■□□□□ 0.96
NCKAP1LP55160 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NCKAP1LP55160 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKAP1LP55160 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKAP1LP55160 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NCKAP1LP55160 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NCKAP1LP55160 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKAP1LP55160 CKBP1-201ENST00000565489 1086 ntBASIC21.05■□□□□ 0.96
NCKAP1LP55160 AP005242.2-201ENST00000580065 1175 ntBASIC21.05■□□□□ 0.96
NCKAP1LP55160 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
NCKAP1LP55160 AP000525.1-201ENST00000608286 694 ntBASIC21.05■□□□□ 0.96
NCKAP1LP55160 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCKAP1LP55160 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.05■□□□□ 0.96
NCKAP1LP55160 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKAP1LP55160 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NCKAP1LP55160 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCKAP1LP55160 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 AC097488.1-201ENST00000507834 756 ntBASIC21.04■□□□□ 0.96
NCKAP1LP55160 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.04■□□□□ 0.96
NCKAP1LP55160 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKAP1LP55160 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms