Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.84■□□□□ 0.77
PMS2P54278 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PMS2P54278 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.84■□□□□ 0.77
PMS2P54278 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
PMS2P54278 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PMS2P54278 FP475955.4-201ENST00000623131 1990 ntBASIC19.84■□□□□ 0.77
PMS2P54278 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.84■□□□□ 0.77
PMS2P54278 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.84■□□□□ 0.77
PMS2P54278 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PMS2P54278 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.84■□□□□ 0.77
PMS2P54278 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.83■□□□□ 0.77
PMS2P54278 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.83■□□□□ 0.77
PMS2P54278 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.83■□□□□ 0.77
PMS2P54278 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.83■□□□□ 0.77
PMS2P54278 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PMS2P54278 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PMS2P54278 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PMS2P54278 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.83■□□□□ 0.77
PMS2P54278 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PMS2P54278 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PMS2P54278 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.83■□□□□ 0.77
PMS2P54278 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.83■□□□□ 0.77
PMS2P54278 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PMS2P54278 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PMS2P54278 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
PMS2P54278 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PMS2P54278 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PMS2P54278 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PMS2P54278 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PMS2P54278 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
PMS2P54278 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.83■□□□□ 0.76
PMS2P54278 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PMS2P54278 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PMS2P54278 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PMS2P54278 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS2P54278 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS2P54278 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PMS2P54278 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
PMS2P54278 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PMS2P54278 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.82■□□□□ 0.76
PMS2P54278 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS2P54278 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS2P54278 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.82■□□□□ 0.76
PMS2P54278 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS2P54278 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS2P54278 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PMS2P54278 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PMS2P54278 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS2P54278 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PMS2P54278 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS2P54278 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS2P54278 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.82■□□□□ 0.76
PMS2P54278 ZNF815P-204ENST00000434898 1737 ntBASIC19.82■□□□□ 0.76
PMS2P54278 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PMS2P54278 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.81■□□□□ 0.76
PMS2P54278 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PMS2P54278 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
PMS2P54278 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PMS2P54278 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PMS2P54278 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PMS2P54278 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.81■□□□□ 0.76
PMS2P54278 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.81■□□□□ 0.76
PMS2P54278 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.81■□□□□ 0.76
PMS2P54278 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PMS2P54278 BICD1-207ENST00000551848 1962 ntBASIC19.81■□□□□ 0.76
PMS2P54278 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PMS2P54278 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.8■□□□□ 0.76
PMS2P54278 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PMS2P54278 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.8■□□□□ 0.76
PMS2P54278 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms