Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
ATXN1P54253 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.19■□□□□ 0.82
ATXN1P54253 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 AC113347.1-201ENST00000413321 391 ntBASIC20.19■□□□□ 0.82
ATXN1P54253 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.19■□□□□ 0.82
ATXN1P54253 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.19■□□□□ 0.82
ATXN1P54253 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.19■□□□□ 0.82
ATXN1P54253 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.19■□□□□ 0.82
ATXN1P54253 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.19■□□□□ 0.82
ATXN1P54253 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.19■□□□□ 0.82
ATXN1P54253 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.19■□□□□ 0.82
ATXN1P54253 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.19■□□□□ 0.82
ATXN1P54253 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.19■□□□□ 0.82
ATXN1P54253 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
ATXN1P54253 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATXN1P54253 AC005332.7-201ENST00000614046 2005 ntBASIC20.19■□□□□ 0.82
ATXN1P54253 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ATXN1P54253 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATXN1P54253 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.18■□□□□ 0.82
ATXN1P54253 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.18■□□□□ 0.82
ATXN1P54253 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.18■□□□□ 0.82
ATXN1P54253 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.18■□□□□ 0.82
ATXN1P54253 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.18■□□□□ 0.82
ATXN1P54253 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.18■□□□□ 0.82
ATXN1P54253 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.18■□□□□ 0.82
ATXN1P54253 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.18■□□□□ 0.82
ATXN1P54253 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.18■□□□□ 0.82
ATXN1P54253 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATXN1P54253 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.17■□□□□ 0.82
ATXN1P54253 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATXN1P54253 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.17■□□□□ 0.82
ATXN1P54253 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.17■□□□□ 0.82
ATXN1P54253 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ATXN1P54253 AL032819.2-201ENST00000624543 2162 ntBASIC20.17■□□□□ 0.82
ATXN1P54253 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.17■□□□□ 0.82
ATXN1P54253 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.17■□□□□ 0.82
ATXN1P54253 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.17■□□□□ 0.82
ATXN1P54253 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATXN1P54253 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ATXN1P54253 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
ATXN1P54253 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATXN1P54253 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.16■□□□□ 0.82
ATXN1P54253 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ATXN1P54253 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN1P54253 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATXN1P54253 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN1P54253 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN1P54253 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.16■□□□□ 0.82
ATXN1P54253 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN1P54253 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN1P54253 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN1P54253 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN1P54253 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN1P54253 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN1P54253 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.15■□□□□ 0.82
ATXN1P54253 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
ATXN1P54253 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN1P54253 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN1P54253 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN1P54253 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN1P54253 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.15■□□□□ 0.82
ATXN1P54253 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.15■□□□□ 0.82
ATXN1P54253 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.15■□□□□ 0.82
ATXN1P54253 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN1P54253 DUX4L26-201ENST00000489078 1255 ntBASIC20.15■□□□□ 0.82
ATXN1P54253 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.15■□□□□ 0.82
ATXN1P54253 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATXN1P54253 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.15■□□□□ 0.82
ATXN1P54253 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN1P54253 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN1P54253 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms