Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.01■□□□□ 0.63
LIMK1P53667 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.01■□□□□ 0.63
LIMK1P53667 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.01■□□□□ 0.63
LIMK1P53667 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.01■□□□□ 0.63
LIMK1P53667 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.01■□□□□ 0.63
LIMK1P53667 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.01■□□□□ 0.63
LIMK1P53667 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.01■□□□□ 0.63
LIMK1P53667 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LIMK1P53667 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.01■□□□□ 0.63
LIMK1P53667 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.01■□□□□ 0.63
LIMK1P53667 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LIMK1P53667 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 LINC01311-201ENST00000565162 1445 ntBASIC19■□□□□ 0.63
LIMK1P53667 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LIMK1P53667 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19■□□□□ 0.63
LIMK1P53667 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19■□□□□ 0.63
LIMK1P53667 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 NEK4P2-201ENST00000580004 1012 ntBASIC19■□□□□ 0.63
LIMK1P53667 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19■□□□□ 0.63
LIMK1P53667 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19■□□□□ 0.63
LIMK1P53667 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19■□□□□ 0.63
LIMK1P53667 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19■□□□□ 0.63
LIMK1P53667 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LIMK1P53667 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LIMK1P53667 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.99■□□□□ 0.63
LIMK1P53667 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
LIMK1P53667 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.99■□□□□ 0.63
LIMK1P53667 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.99■□□□□ 0.63
LIMK1P53667 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.99■□□□□ 0.63
LIMK1P53667 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.99■□□□□ 0.63
LIMK1P53667 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.99■□□□□ 0.63
LIMK1P53667 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.99■□□□□ 0.63
LIMK1P53667 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.99■□□□□ 0.63
LIMK1P53667 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.99■□□□□ 0.63
LIMK1P53667 AC092329.2-201ENST00000598402 547 ntBASIC18.99■□□□□ 0.63
LIMK1P53667 AC092119.3-201ENST00000612618 583 ntBASIC18.99■□□□□ 0.63
LIMK1P53667 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.99■□□□□ 0.63
LIMK1P53667 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK1P53667 AL049796.1-201ENST00000565336 1766 ntBASIC18.98■□□□□ 0.63
LIMK1P53667 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK1P53667 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK1P53667 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK1P53667 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK1P53667 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.98■□□□□ 0.63
LIMK1P53667 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.98■□□□□ 0.63
LIMK1P53667 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK1P53667 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK1P53667 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.98■□□□□ 0.63
LIMK1P53667 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.98■□□□□ 0.63
LIMK1P53667 Z85996.1-201ENST00000494644 937 ntBASIC18.98■□□□□ 0.63
LIMK1P53667 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
LIMK1P53667 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
LIMK1P53667 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.98■□□□□ 0.63
LIMK1P53667 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.98■□□□□ 0.63
LIMK1P53667 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms