Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MCU-209ENST00000604679 1074 ntTSL 512.52□□□□□ -0.411e-6■■□□□ 13.5
NCBP2P52298 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.431e-9■■□□□ 13.5
NCBP2P52298 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.481e-6■■□□□ 13.5
NCBP2P52298 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.481e-9■■□□□ 13.5
NCBP2P52298 TCEA2-214ENST00000476113 421 ntTSL 211.23□□□□□ -0.611e-6■■□□□ 13.5
NCBP2P52298 PNPO-214ENST00000641703 1131 nt11.14□□□□□ -0.631e-6■■□□□ 13.5
NCBP2P52298 LZIC-202ENST00000377223 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.751e-6■■□□□ 13.5
NCBP2P52298 RINT1-208ENST00000497979 2627 ntTSL 510.2□□□□□ -0.781e-9■■□□□ 13.5
NCBP2P52298 MCU-206ENST00000603649 473 ntTSL 59.42□□□□□ -0.91e-6■■□□□ 13.5
NCBP2P52298 AL139353.1-201ENST00000549185 3860 ntTSL 29.08□□□□□ -0.961e-6■■□□□ 13.5
NCBP2P52298 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.031e-6■■□□□ 13.5
NCBP2P52298 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.141e-6■■□□□ 13.5
NCBP2P52298 ZNF146-203ENST00000586094 565 ntTSL 27.63□□□□□ -1.191e-6■■□□□ 13.5
NCBP2P52298 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC7.6□□□□□ -1.191e-6■■□□□ 13.5
NCBP2P52298 PNPO-213ENST00000641511 453 nt7.25□□□□□ -1.251e-6■■□□□ 13.5
NCBP2P52298 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC7.08□□□□□ -1.281e-6■■□□□ 13.5
NCBP2P52298 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.56□□□□□ -1.361e-6■■□□□ 13.5
NCBP2P52298 SDHC-207ENST00000504963 571 ntTSL 46.25□□□□□ -1.411e-6■■□□□ 13.5
NCBP2P52298 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.17□□□□□ -1.421e-6■■□□□ 13.5
NCBP2P52298 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.491e-6■■□□□ 13.5
NCBP2P52298 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.61e-6■■□□□ 13.5
NCBP2P52298 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.781e-6■■□□□ 13.5
NCBP2P52298 ZNF146-205ENST00000591063 533 ntTSL 23.25□□□□□ -1.891e-6■■□□□ 13.5
NCBP2P52298 BBX-224ENST00000474137 546 ntTSL 28.02□□□□□ -1.132e-6■■□□□ 13.5
NCBP2P52298 BBX-225ENST00000485939 555 ntTSL 45.6□□□□□ -1.512e-6■■□□□ 13.5
NCBP2P52298 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.62e-6■■□□□ 13.5
NCBP2P52298 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.652e-6■■□□□ 13.5
NCBP2P52298 BBX-209ENST00000427402 959 ntTSL 53.89□□□□□ -1.792e-6■■□□□ 13.5
NCBP2P52298 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.79□□□□□ -1.82e-6■■□□□ 13.5
NCBP2P52298 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.61■□□□□ 0.419e-10■■□□□ 13.5
NCBP2P52298 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.089e-10■■□□□ 13.5
NCBP2P52298 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.189e-10■■□□□ 13.5
NCBP2P52298 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.711e-10■■□□□ 13.5
NCBP2P52298 SLC23A2-204ENST00000468355 1934 ntTSL 1 (best)14□□□□□ -0.175e-8■■□□□ 13.5
NCBP2P52298 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.15e-8■■□□□ 13.5
NCBP2P52298 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.135e-8■■□□□ 13.5
NCBP2P52298 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.396e-11■■□□□ 13.5
NCBP2P52298 SH3BP4-204ENST00000416021 593 ntTSL 319.45■□□□□ 0.72e-6■■□□□ 13.5
NCBP2P52298 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.282e-6■■□□□ 13.5
NCBP2P52298 ASPSCR1-219ENST00000584454 1919 ntTSL 1 (best)21.47■■□□□ 1.031e-7■■□□□ 13.5
NCBP2P52298 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.951e-7■■□□□ 13.5
NCBP2P52298 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.97■□□□□ 0.951e-7■■□□□ 13.5
NCBP2P52298 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.921e-7■■□□□ 13.5
NCBP2P52298 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.495e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.41■■□□□ 1.185e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-204ENST00000557961 591 ntTSL 221.76■■□□□ 1.075e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.39■□□□□ 0.535e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.2■□□□□ 0.55e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-220ENST00000559930 678 ntTSL 415.92■□□□□ 0.145e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-208ENST00000558746 874 ntTSL 3 BASIC11□□□□□ -0.655e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-210ENST00000558893 1209 ntTSL 1 (best)9.59□□□□□ -0.875e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-209ENST00000558830 616 ntTSL 36.97□□□□□ -1.295e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-218ENST00000559697 551 ntTSL 55.54□□□□□ -1.525e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.28□□□□□ -1.565e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-214ENST00000559258 1047 ntTSL 25□□□□□ -1.615e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-206ENST00000558522 1074 ntTSL 23.96□□□□□ -1.785e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-223ENST00000561171 933 ntTSL 23.96□□□□□ -1.785e-21■■□□□ 13.5
NCBP2P52298 MORF4L1-216ENST00000559619 448 ntTSL 23.51□□□□□ -1.855e-21■■□□□ 13.5
NCBP2P52298 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.123e-9■■□□□ 13.5
NCBP2P52298 TCAF1-204ENST00000478172 576 ntTSL 49.46□□□□□ -0.93e-9■■□□□ 13.5
NCBP2P52298 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.093e-9■■□□□ 13.5
NCBP2P52298 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.59■■□□□ 1.051e-8■■□□□ 13.5
NCBP2P52298 TRAP1-207ENST00000571804 781 ntTSL 521.36■■□□□ 1.011e-8■■□□□ 13.5
NCBP2P52298 TRAP1-215ENST00000576106 555 ntTSL 420.98■□□□□ 0.951e-8■■□□□ 13.5
NCBP2P52298 TRAP1-203ENST00000570403 521 ntTSL 420.75■□□□□ 0.911e-8■■□□□ 13.5
NCBP2P52298 TRAP1-205ENST00000571011 480 ntTSL 519.33■□□□□ 0.681e-8■■□□□ 13.5
NCBP2P52298 TRAP1-211ENST00000574941 558 ntTSL 418.18■□□□□ 0.51e-8■■□□□ 13.5
NCBP2P52298 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.051e-8■■□□□ 13.5
NCBP2P52298 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.32■□□□□ 0.041e-8■■□□□ 13.5
NCBP2P52298 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.18■□□□□ 0.021e-8■■□□□ 13.5
NCBP2P52298 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.37□□□□□ -0.111e-8■■□□□ 13.5
NCBP2P52298 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.331e-8■■□□□ 13.5
NCBP2P52298 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.451e-8■■□□□ 13.5
NCBP2P52298 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC7.93□□□□□ -1.141e-8■■□□□ 13.5
NCBP2P52298 SMAD2-208ENST00000587269 1042 ntTSL 326.91■■□□□ 1.96e-7■■□□□ 13.5
NCBP2P52298 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.89■■□□□ 1.96e-7■■□□□ 13.5
NCBP2P52298 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.66e-7■■□□□ 13.5
NCBP2P52298 ZNF12-202ENST00000394917 662 ntTSL 322.49■■□□□ 1.196e-7■■□□□ 13.5
NCBP2P52298 MCM4-210ENST00000520934 621 ntTSL 322.11■■□□□ 1.136e-7■■□□□ 13.5
NCBP2P52298 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.83■□□□□ 0.766e-7■■□□□ 13.5
NCBP2P52298 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.24■□□□□ 0.676e-7■■□□□ 13.5
NCBP2P52298 EVI5-204ENST00000474806 525 ntTSL 319.18■□□□□ 0.666e-7■■□□□ 13.5
NCBP2P52298 MCM4-211ENST00000520994 522 ntTSL 319.09■□□□□ 0.656e-7■■□□□ 13.5
NCBP2P52298 PSMC3IP-205ENST00000587268 838 ntTSL 418.79■□□□□ 0.63e-8■■□□□ 13.5
NCBP2P52298 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.596e-7■■□□□ 13.5
NCBP2P52298 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.596e-7■■□□□ 13.5
NCBP2P52298 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.576e-7■■□□□ 13.5
NCBP2P52298 ZNF513-203ENST00000436006 510 ntTSL 218.36■□□□□ 0.536e-7■■□□□ 13.5
NCBP2P52298 NGLY1-212ENST00000478991 582 ntTSL 218.29■□□□□ 0.526e-7■■□□□ 13.5
NCBP2P52298 NGLY1-209ENST00000463611 570 ntTSL 418.29■□□□□ 0.526e-7■■□□□ 13.5
NCBP2P52298 SMYD2-203ENST00000460580 1618 ntTSL 1 (best)18.28■□□□□ 0.526e-7■■□□□ 13.5
NCBP2P52298 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.27■□□□□ 0.523e-8■■□□□ 13.5
NCBP2P52298 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.516e-7■■□□□ 13.5
NCBP2P52298 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.496e-7■■□□□ 13.5
NCBP2P52298 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.426e-7■■□□□ 13.5
NCBP2P52298 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.416e-7■■□□□ 13.5
NCBP2P52298 SCAI-205ENST00000477186 1808 ntTSL 217.57■□□□□ 0.46e-7■■□□□ 13.5
NCBP2P52298 NGLY1-211ENST00000474611 478 ntTSL 317.1■□□□□ 0.336e-7■■□□□ 13.5
NCBP2P52298 PSMC3IP-209ENST00000590931 1049 ntTSL 1 (best)17.06■□□□□ 0.323e-8■■□□□ 13.5
NCBP2P52298 PSMC3IP-206ENST00000588544 902 ntTSL 1 (best)17.06■□□□□ 0.323e-8■■□□□ 13.5
Retrieved 100 of 18,329 protein–RNA pairs in 162.4 ms