RNA–Protein interactions for RNA: ENST00000474137.1

BBX-224, Transcript of BBX, HMG-box containing, humanhuman

TSL 2

Gene BBX, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-224ENST00000474137 AEBP2Q6ZN18 517 aaPredicted RBP31.26■■■□□ 2.59
BBX-224ENST00000474137 CHIC1Q5VXU3 224 aa29.33■■■□□ 2.29
BBX-224ENST00000474137 SENP3Q9H4L4 574 aaPredicted RBP26.92■■□□□ 1.9
BBX-224ENST00000474137 PHF23Q9BUL5 403 aaPredicted RBP26.39■■□□□ 1.82
BBX-224ENST00000474137 FOXD1Q16676 465 aa25.13■■□□□ 1.61
BBX-224ENST00000474137 POTEDQ86YR6 584 aa24.82■■□□□ 1.56
BBX-224ENST00000474137 MSH5O43196 834 aa23.95■■□□□ 1.42
BBX-224ENST00000474137 PIAS4Q8N2W9 510 aaPredicted RBP23.32■■□□□ 1.32
BBX-224ENST00000474137 PPP6R1Q9UPN7 881 aa22.76■■□□□ 1.23
BBX-224ENST00000474137 PLPPR3Q6T4P5 718 aa22.72■■□□□ 1.23
BBX-224ENST00000474137 ADRA2BP18089 450 aa22.67■■□□□ 1.22
BBX-224ENST00000474137 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
BBX-224ENST00000474137 CACNB1Q02641 598 aaPredicted RBP21.09■□□□□ 0.97
BBX-224ENST00000474137 MAPK8IP2Q13387 824 aaPredicted RBP21.08■□□□□ 0.97
BBX-224ENST00000474137 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
BBX-224ENST00000474137 NISCHQ9Y2I1 1504 aa20.74■□□□□ 0.91
BBX-224ENST00000474137 DCAF8L1A6NGE4 600 aa20.41■□□□□ 0.86
BBX-224ENST00000474137 RNF39Q9H2S5 420 aa20.3■□□□□ 0.84
BBX-224ENST00000474137 HOXD11P31277 338 aaPredicted RBP20.03■□□□□ 0.8
BBX-224ENST00000474137 C1QBPQ07021 282 aaKnown RBP19.99■□□□□ 0.79
BBX-224ENST00000474137 PPP4R3CPQ6ZMV5 832 aa19.76■□□□□ 0.75
BBX-224ENST00000474137 RNF216Q9NWF9 866 aaPredicted RBP19.68■□□□□ 0.74
BBX-224ENST00000474137 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
BBX-224ENST00000474137 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
BBX-224ENST00000474137 POTEHQ6S545 545 aa19.31■□□□□ 0.68
BBX-224ENST00000474137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.66
BBX-224ENST00000474137 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
BBX-224ENST00000474137 DSG3P32926 999 aa18.7■□□□□ 0.58
BBX-224ENST00000474137 CAPN15O75808 1086 aa18.66■□□□□ 0.58
BBX-224ENST00000474137 U3KPZ7 1027 aaPredicted RBP18.58■□□□□ 0.56
BBX-224ENST00000474137 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
BBX-224ENST00000474137 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
BBX-224ENST00000474137 NPM3O75607 178 aaKnown RBP18.45■□□□□ 0.54
BBX-224ENST00000474137 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
BBX-224ENST00000474137 ABCB7O75027 752 aa18.11■□□□□ 0.49
BBX-224ENST00000474137 APLP2Q06481 763 aa18.11■□□□□ 0.49
BBX-224ENST00000474137 ZNF219Q9P2Y4 722 aaPredicted RBP18.1■□□□□ 0.49
BBX-224ENST00000474137 ABCC9O60706 1549 aa18.05■□□□□ 0.48
BBX-224ENST00000474137 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
BBX-224ENST00000474137 CHRDL2Q6WN34 429 aa17.87■□□□□ 0.45
BBX-224ENST00000474137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
BBX-224ENST00000474137 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
BBX-224ENST00000474137 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
BBX-224ENST00000474137 SP7Q8TDD2 431 aaPredicted RBP17.69■□□□□ 0.42
BBX-224ENST00000474137 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
BBX-224ENST00000474137 POLA2Q14181 598 aa17.42■□□□□ 0.38
BBX-224ENST00000474137 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
BBX-224ENST00000474137 DCAF8L2P0C7V8 631 aa17.39■□□□□ 0.37
BBX-224ENST00000474137 NACADO15069 1562 aa17.35■□□□□ 0.37
BBX-224ENST00000474137 AKT1S1Q96B36 256 aa17.31■□□□□ 0.36
BBX-224ENST00000474137 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
BBX-224ENST00000474137 KCNA4P22459 653 aa17.28■□□□□ 0.36
BBX-224ENST00000474137 PIP4P2Q8N4L2 257 aa17.23■□□□□ 0.35
BBX-224ENST00000474137 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.34
BBX-224ENST00000474137 HAX1O00165 279 aa17.2■□□□□ 0.34
BBX-224ENST00000474137 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
BBX-224ENST00000474137 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
BBX-224ENST00000474137 REM2Q8IYK8 340 aaPredicted RBP17.12■□□□□ 0.33
BBX-224ENST00000474137 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
BBX-224ENST00000474137 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.31
BBX-224ENST00000474137 PITPNM1O00562 1244 aa16.95■□□□□ 0.3
BBX-224ENST00000474137 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
BBX-224ENST00000474137 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
BBX-224ENST00000474137 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
BBX-224ENST00000474137 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
BBX-224ENST00000474137 EVX2Q03828 476 aa16.81■□□□□ 0.28
BBX-224ENST00000474137 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.27
BBX-224ENST00000474137 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
BBX-224ENST00000474137 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
BBX-224ENST00000474137 LHX8Q68G74 356 aa16.57■□□□□ 0.24
BBX-224ENST00000474137 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
BBX-224ENST00000474137 C19orf67A6NJJ6 358 aa16.47■□□□□ 0.23
BBX-224ENST00000474137 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
BBX-224ENST00000474137 GABBR2O75899 941 aa16.45■□□□□ 0.22
BBX-224ENST00000474137 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
BBX-224ENST00000474137 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
BBX-224ENST00000474137 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
BBX-224ENST00000474137 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
BBX-224ENST00000474137 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.21
BBX-224ENST00000474137 SPDYE1Q8NFV5 336 aaPredicted RBP16.36■□□□□ 0.21
BBX-224ENST00000474137 CC2D2AQ9P2K1 1620 aa16.31■□□□□ 0.2
BBX-224ENST00000474137 PLSCR2Q9NRY7 297 aa16.3■□□□□ 0.2
BBX-224ENST00000474137 FBLN2P98095 1184 aa16.26■□□□□ 0.19
BBX-224ENST00000474137 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
BBX-224ENST00000474137 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
BBX-224ENST00000474137 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
BBX-224ENST00000474137 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
BBX-224ENST00000474137 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
BBX-224ENST00000474137 ZNF692Q9BU19 519 aaPredicted RBP16.09■□□□□ 0.17
BBX-224ENST00000474137 SSUH2Q9Y2M2 353 aa16.06■□□□□ 0.16
BBX-224ENST00000474137 ATXN8OSP0DMR3 200 aa16.05■□□□□ 0.16
BBX-224ENST00000474137 POTEIP0CG38 1075 aa16.04■□□□□ 0.16
BBX-224ENST00000474137 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
BBX-224ENST00000474137 PRR29P0C7W0 189 aa16■□□□□ 0.15
BBX-224ENST00000474137 ATAD2BQ9ULI0 1458 aa15.99■□□□□ 0.15
BBX-224ENST00000474137 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
BBX-224ENST00000474137 CD44P16070 742 aaKnown RBP15.96■□□□□ 0.15
BBX-224ENST00000474137 CLCN6P51797 869 aa15.96■□□□□ 0.15
BBX-224ENST00000474137 NCAPD3P42695 1498 aa15.95■□□□□ 0.14
BBX-224ENST00000474137 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms