Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 AC011298.2-201ENST00000617989 482 ntBASIC24.3■■□□□ 1.48
CCT4P50991 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
CCT4P50991 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
CCT4P50991 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCT4P50991 AC007952.6-201ENST00000573168 2673 ntBASIC24.3■■□□□ 1.48
CCT4P50991 AC003957.1-201ENST00000625108 2673 ntBASIC24.3■■□□□ 1.48
CCT4P50991 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.3■■□□□ 1.48
CCT4P50991 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCT4P50991 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.29■■□□□ 1.48
CCT4P50991 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.29■■□□□ 1.48
CCT4P50991 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.29■■□□□ 1.48
CCT4P50991 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC24.29■■□□□ 1.48
CCT4P50991 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.29■■□□□ 1.48
CCT4P50991 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.29■■□□□ 1.48
CCT4P50991 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CCT4P50991 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.29■■□□□ 1.48
CCT4P50991 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCT4P50991 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CCT4P50991 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCT4P50991 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCT4P50991 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.29■■□□□ 1.48
CCT4P50991 AL032819.2-201ENST00000624543 2162 ntBASIC24.29■■□□□ 1.48
CCT4P50991 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCT4P50991 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCT4P50991 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.28■■□□□ 1.48
CCT4P50991 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CCT4P50991 AC116562.4-201ENST00000641316 2276 ntBASIC24.28■■□□□ 1.48
CCT4P50991 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.28■■□□□ 1.48
CCT4P50991 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC24.28■■□□□ 1.48
CCT4P50991 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.28■■□□□ 1.48
CCT4P50991 AL390955.1-201ENST00000428694 934 ntBASIC24.28■■□□□ 1.48
CCT4P50991 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC24.28■■□□□ 1.48
CCT4P50991 RN7SL850P-201ENST00000579959 291 ntBASIC24.28■■□□□ 1.48
CCT4P50991 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.28■■□□□ 1.48
CCT4P50991 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CCT4P50991 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.28■■□□□ 1.48
CCT4P50991 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCT4P50991 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CCT4P50991 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CCT4P50991 AC005332.7-201ENST00000614046 2005 ntBASIC24.27■■□□□ 1.48
CCT4P50991 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24.27■■□□□ 1.48
CCT4P50991 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 TMPOP1-202ENST00000424642 1267 ntBASIC24.27■■□□□ 1.48
CCT4P50991 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.27■■□□□ 1.48
CCT4P50991 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.27■■□□□ 1.48
CCT4P50991 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.27■■□□□ 1.48
CCT4P50991 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC24.27■■□□□ 1.48
CCT4P50991 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCT4P50991 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCT4P50991 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCT4P50991 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
CCT4P50991 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCT4P50991 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCT4P50991 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
CCT4P50991 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.26■■□□□ 1.47
CCT4P50991 FITM1-202ENST00000559294 800 ntBASIC24.26■■□□□ 1.47
CCT4P50991 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.26■■□□□ 1.47
CCT4P50991 DGCR10-201ENST00000609839 495 ntBASIC24.26■■□□□ 1.47
CCT4P50991 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
CCT4P50991 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CCT4P50991 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CCT4P50991 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCT4P50991 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCT4P50991 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCT4P50991 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.26■■□□□ 1.47
CCT4P50991 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.26■■□□□ 1.47
CCT4P50991 CYP2D8P-201ENST00000433633 1490 ntBASIC24.26■■□□□ 1.47
CCT4P50991 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCT4P50991 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CCT4P50991 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCT4P50991 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
CCT4P50991 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
CCT4P50991 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
CCT4P50991 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.25■■□□□ 1.47
CCT4P50991 TSPY21P-201ENST00000433481 731 ntBASIC24.25■■□□□ 1.47
CCT4P50991 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
CCT4P50991 AP000692.2-201ENST00000608391 879 ntBASIC24.25■■□□□ 1.47
CCT4P50991 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms