Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.32■■□□□ 1
CPT1AP50416 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.32■■□□□ 1
CPT1AP50416 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CPT1AP50416 TSPY21P-201ENST00000433481 731 ntBASIC21.32■■□□□ 1
CPT1AP50416 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.32■■□□□ 1
CPT1AP50416 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CPT1AP50416 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.32■■□□□ 1
CPT1AP50416 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.32■■□□□ 1
CPT1AP50416 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.32■■□□□ 1
CPT1AP50416 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPT1AP50416 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CPT1AP50416 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.31■■□□□ 1
CPT1AP50416 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.31■■□□□ 1
CPT1AP50416 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.31■■□□□ 1
CPT1AP50416 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPT1AP50416 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.31■■□□□ 1
CPT1AP50416 LINC01311-201ENST00000565162 1445 ntBASIC21.31■■□□□ 1
CPT1AP50416 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.31■■□□□ 1
CPT1AP50416 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CPT1AP50416 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CPT1AP50416 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.31■■□□□ 1
CPT1AP50416 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPT1AP50416 HCG4P8-203ENST00000443049 980 ntBASIC21.31■■□□□ 1
CPT1AP50416 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.31■■□□□ 1
CPT1AP50416 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.31■■□□□ 1
CPT1AP50416 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.31■■□□□ 1
CPT1AP50416 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CPT1AP50416 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.31■■□□□ 1
CPT1AP50416 HYMAI.1-201ENST00000620949 238 ntBASIC21.31■■□□□ 1
CPT1AP50416 CR769767.2-201ENST00000622735 460 ntBASIC21.31■■□□□ 1
CPT1AP50416 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.31■■□□□ 1
CPT1AP50416 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPT1AP50416 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.31■■□□□ 1
CPT1AP50416 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPT1AP50416 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.31■■□□□ 1
CPT1AP50416 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPT1AP50416 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.3■■□□□ 1
CPT1AP50416 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CPT1AP50416 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.3■■□□□ 1
CPT1AP50416 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CPT1AP50416 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CPT1AP50416 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.3■■□□□ 1
CPT1AP50416 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.3■■□□□ 1
CPT1AP50416 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CPT1AP50416 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CPT1AP50416 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.3■■□□□ 1
CPT1AP50416 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.29■■□□□ 1
CPT1AP50416 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.29■■□□□ 1
CPT1AP50416 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.29■■□□□ 1
CPT1AP50416 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.29■■□□□ 1
CPT1AP50416 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.29■■□□□ 1
CPT1AP50416 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 TSPY23P-201ENST00000440136 739 ntBASIC21.29■■□□□ 1
CPT1AP50416 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.29■■□□□ 1
CPT1AP50416 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CPT1AP50416 AC099778.1-201ENST00000568593 1911 ntBASIC21.29■■□□□ 1
CPT1AP50416 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CPT1AP50416 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CPT1AP50416 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CPT1AP50416 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.28■■□□□ 1
CPT1AP50416 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CPT1AP50416 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPT1AP50416 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CPT1AP50416 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPT1AP50416 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.28■■□□□ 1
CPT1AP50416 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms