Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
IDH3AP50213 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.7■□□□□ 0.58
IDH3AP50213 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
IDH3AP50213 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IDH3AP50213 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.69■□□□□ 0.58
IDH3AP50213 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.69■□□□□ 0.58
IDH3AP50213 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.69■□□□□ 0.58
IDH3AP50213 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
IDH3AP50213 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
IDH3AP50213 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 GPX1P1-201ENST00000388829 606 ntBASIC18.69■□□□□ 0.58
IDH3AP50213 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.69■□□□□ 0.58
IDH3AP50213 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.69■□□□□ 0.58
IDH3AP50213 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.69■□□□□ 0.58
IDH3AP50213 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
IDH3AP50213 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.69■□□□□ 0.58
IDH3AP50213 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.69■□□□□ 0.58
IDH3AP50213 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.69■□□□□ 0.58
IDH3AP50213 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
IDH3AP50213 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
IDH3AP50213 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IDH3AP50213 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
IDH3AP50213 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IDH3AP50213 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IDH3AP50213 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.68■□□□□ 0.58
IDH3AP50213 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.68■□□□□ 0.58
IDH3AP50213 OR10C1-204ENST00000622521 1039 ntBASIC18.68■□□□□ 0.58
IDH3AP50213 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.68■□□□□ 0.58
IDH3AP50213 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.68■□□□□ 0.58
IDH3AP50213 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IDH3AP50213 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
IDH3AP50213 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IDH3AP50213 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.67■□□□□ 0.58
IDH3AP50213 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.67■□□□□ 0.58
IDH3AP50213 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.67■□□□□ 0.58
IDH3AP50213 FEM1AP3-201ENST00000403722 1741 ntBASIC18.67■□□□□ 0.58
IDH3AP50213 ANO7L1-203ENST00000602586 1720 ntBASIC18.67■□□□□ 0.58
IDH3AP50213 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 AC034268.1-201ENST00000441047 882 ntBASIC18.67■□□□□ 0.58
IDH3AP50213 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.67■□□□□ 0.58
IDH3AP50213 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.67■□□□□ 0.58
IDH3AP50213 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.67■□□□□ 0.58
IDH3AP50213 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
IDH3AP50213 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IDH3AP50213 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.67■□□□□ 0.58
IDH3AP50213 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.67■□□□□ 0.58
IDH3AP50213 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
IDH3AP50213 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 LTB4R2-202ENST00000528054 3092 ntBASIC18.67■□□□□ 0.58
IDH3AP50213 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IDH3AP50213 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms