Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 AL359736.2-201ENST00000621992 437 ntBASIC17.11■□□□□ 0.33
CSNK1A1P48729 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 SDHAP1-207ENST00000440850 2000 ntBASIC17.11■□□□□ 0.33
CSNK1A1P48729 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 AL160286.2-201ENST00000567150 934 ntBASIC17.1■□□□□ 0.33
CSNK1A1P48729 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 HTR7P1-201ENST00000538670 1336 ntBASIC17.1■□□□□ 0.33
CSNK1A1P48729 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1A1P48729 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSNK1A1P48729 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 ABHD17AP1-201ENST00000358206 933 ntBASIC17.09■□□□□ 0.33
CSNK1A1P48729 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 AP002982.1-201ENST00000492365 877 ntBASIC17.09■□□□□ 0.33
CSNK1A1P48729 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 AC142381.4-202ENST00000563973 229 ntBASIC17.09■□□□□ 0.33
CSNK1A1P48729 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 LINC01465-201ENST00000408887 1940 ntBASIC17.09■□□□□ 0.33
CSNK1A1P48729 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CSNK1A1P48729 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1A1P48729 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1A1P48729 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1A1P48729 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CSNK1A1P48729 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1A1P48729 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1A1P48729 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CSNK1A1P48729 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1A1P48729 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1A1P48729 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1A1P48729 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1A1P48729 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 AL353807.1-201ENST00000427475 662 ntBASIC17.08■□□□□ 0.32
CSNK1A1P48729 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1A1P48729 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1A1P48729 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CSNK1A1P48729 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.08■□□□□ 0.32
CSNK1A1P48729 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CSNK1A1P48729 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CSNK1A1P48729 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms