Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
HTTP42858 AC121338.2-201ENST00000622535 1744 ntBASIC21.69■■□□□ 1.06
HTTP42858 AKR1C7P-201ENST00000305623 895 ntBASIC21.69■■□□□ 1.06
HTTP42858 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.69■■□□□ 1.06
HTTP42858 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTTP42858 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HTTP42858 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTTP42858 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.68■■□□□ 1.06
HTTP42858 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.68■■□□□ 1.06
HTTP42858 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HTTP42858 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HTTP42858 AL353801.3-201ENST00000609898 542 ntBASIC21.68■■□□□ 1.06
HTTP42858 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HTTP42858 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.68■■□□□ 1.06
HTTP42858 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTTP42858 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.68■■□□□ 1.06
HTTP42858 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTTP42858 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HTTP42858 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTTP42858 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.68■■□□□ 1.06
HTTP42858 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTTP42858 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.68■■□□□ 1.06
HTTP42858 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.67■■□□□ 1.06
HTTP42858 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
HTTP42858 AP000867.3-201ENST00000524675 377 ntBASIC21.67■■□□□ 1.06
HTTP42858 AP005901.3-202ENST00000581653 237 ntBASIC21.67■■□□□ 1.06
HTTP42858 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTTP42858 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTTP42858 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.67■■□□□ 1.06
HTTP42858 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HTTP42858 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.67■■□□□ 1.06
HTTP42858 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
HTTP42858 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTTP42858 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HTTP42858 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.66■■□□□ 1.06
HTTP42858 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HTTP42858 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HTTP42858 AL160286.2-201ENST00000567150 934 ntBASIC21.66■■□□□ 1.06
HTTP42858 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTTP42858 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HTTP42858 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.66■■□□□ 1.06
HTTP42858 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTTP42858 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTTP42858 AC138894.3-201ENST00000603787 634 ntBASIC21.66■■□□□ 1.06
HTTP42858 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTTP42858 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HTTP42858 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.66■■□□□ 1.06
HTTP42858 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.66■■□□□ 1.06
HTTP42858 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.66■■□□□ 1.06
HTTP42858 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTTP42858 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.66■■□□□ 1.06
HTTP42858 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
HTTP42858 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.65■■□□□ 1.06
HTTP42858 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.65■■□□□ 1.06
HTTP42858 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
HTTP42858 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.65■■□□□ 1.06
HTTP42858 AL391422.3-201ENST00000603791 2761 ntBASIC21.65■■□□□ 1.06
HTTP42858 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HTTP42858 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
HTTP42858 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.65■■□□□ 1.06
HTTP42858 SEC1P-202ENST00000473944 940 ntBASIC21.65■■□□□ 1.06
HTTP42858 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.65■■□□□ 1.06
HTTP42858 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.65■■□□□ 1.06
HTTP42858 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
HTTP42858 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.65■■□□□ 1.06
HTTP42858 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTTP42858 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HTTP42858 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HTTP42858 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.64■■□□□ 1.06
HTTP42858 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.64■■□□□ 1.06
HTTP42858 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
HTTP42858 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
HTTP42858 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.64■■□□□ 1.05
HTTP42858 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.64■■□□□ 1.05
HTTP42858 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HTTP42858 GPAT2P1-201ENST00000444924 1672 ntBASIC21.63■■□□□ 1.05
HTTP42858 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HTTP42858 AL117328.2-201ENST00000624617 1940 ntBASIC21.63■■□□□ 1.05
HTTP42858 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HTTP42858 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.63■■□□□ 1.05
HTTP42858 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms