Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.74■□□□□ 0.27
GDNFP39905 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GDNFP39905 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GDNFP39905 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GDNFP39905 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.73■□□□□ 0.27
GDNFP39905 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDNFP39905 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
GDNFP39905 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GDNFP39905 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.73■□□□□ 0.27
GDNFP39905 KRT16P6-202ENST00000425692 1426 ntBASIC16.73■□□□□ 0.27
GDNFP39905 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDNFP39905 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.73■□□□□ 0.27
GDNFP39905 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDNFP39905 MIR663A-201ENST00000385250 93 ntBASIC16.73■□□□□ 0.27
GDNFP39905 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDNFP39905 AL355472.2-201ENST00000422958 438 ntBASIC16.73■□□□□ 0.27
GDNFP39905 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
GDNFP39905 CROCCP5-201ENST00000436658 830 ntBASIC16.73■□□□□ 0.27
GDNFP39905 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.73■□□□□ 0.27
GDNFP39905 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.73■□□□□ 0.27
GDNFP39905 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.73■□□□□ 0.27
GDNFP39905 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GDNFP39905 AL031598.1-201ENST00000561511 1773 ntBASIC16.73■□□□□ 0.27
GDNFP39905 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.73■□□□□ 0.27
GDNFP39905 AC068880.1-201ENST00000507289 2297 ntBASIC16.73■□□□□ 0.27
GDNFP39905 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.73■□□□□ 0.27
GDNFP39905 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDNFP39905 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.73■□□□□ 0.27
GDNFP39905 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDNFP39905 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDNFP39905 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
GDNFP39905 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 AC087633.2-202ENST00000565166 1439 ntBASIC16.72■□□□□ 0.27
GDNFP39905 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GDNFP39905 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.72■□□□□ 0.27
GDNFP39905 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.72■□□□□ 0.27
GDNFP39905 AC026185.1-201ENST00000445748 174 ntBASIC16.72■□□□□ 0.27
GDNFP39905 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.72■□□□□ 0.27
GDNFP39905 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.72■□□□□ 0.27
GDNFP39905 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.72■□□□□ 0.27
GDNFP39905 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.72■□□□□ 0.27
GDNFP39905 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.72■□□□□ 0.27
GDNFP39905 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDNFP39905 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.71■□□□□ 0.27
GDNFP39905 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GDNFP39905 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GDNFP39905 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
GDNFP39905 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.71■□□□□ 0.27
GDNFP39905 PGM5P4-201ENST00000421970 445 ntBASIC16.71■□□□□ 0.27
GDNFP39905 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.71■□□□□ 0.27
GDNFP39905 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.71■□□□□ 0.27
GDNFP39905 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.71■□□□□ 0.27
GDNFP39905 AC069236.1-201ENST00000604339 616 ntBASIC16.71■□□□□ 0.27
GDNFP39905 AL356652.1-201ENST00000615962 565 ntBASIC16.71■□□□□ 0.27
GDNFP39905 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GDNFP39905 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.71■□□□□ 0.27
GDNFP39905 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.71■□□□□ 0.27
GDNFP39905 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
GDNFP39905 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.71■□□□□ 0.27
GDNFP39905 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDNFP39905 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GDNFP39905 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GDNFP39905 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
GDNFP39905 KRT8P17-201ENST00000453110 1448 ntBASIC16.7■□□□□ 0.26
GDNFP39905 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 PTBP1P-201ENST00000554374 1601 ntBASIC16.7■□□□□ 0.26
GDNFP39905 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 AC141586.3-201ENST00000562166 1838 ntBASIC16.7■□□□□ 0.26
GDNFP39905 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms