Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.43■□□□□ 0.7
RPA3P35244 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RPA3P35244 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.42■□□□□ 0.7
RPA3P35244 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.42■□□□□ 0.7
RPA3P35244 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.42■□□□□ 0.7
RPA3P35244 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RPA3P35244 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPA3P35244 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.41■□□□□ 0.7
RPA3P35244 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.41■□□□□ 0.7
RPA3P35244 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.41■□□□□ 0.7
RPA3P35244 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.41■□□□□ 0.7
RPA3P35244 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.41■□□□□ 0.7
RPA3P35244 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.41■□□□□ 0.7
RPA3P35244 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.41■□□□□ 0.7
RPA3P35244 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RPA3P35244 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPA3P35244 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.41■□□□□ 0.7
RPA3P35244 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.4■□□□□ 0.7
RPA3P35244 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RPA3P35244 AC090164.3-201ENST00000610780 2143 ntBASIC19.4■□□□□ 0.7
RPA3P35244 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.4■□□□□ 0.7
RPA3P35244 AL031598.1-201ENST00000561511 1773 ntBASIC19.4■□□□□ 0.7
RPA3P35244 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.4■□□□□ 0.7
RPA3P35244 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RPA3P35244 AL390719.1-204ENST00000412397 1219 ntBASIC19.4■□□□□ 0.7
RPA3P35244 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 AC023632.3-201ENST00000521633 145 ntBASIC19.4■□□□□ 0.7
RPA3P35244 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.4■□□□□ 0.7
RPA3P35244 HLA-B-256ENST00000639848 1089 ntBASIC19.4■□□□□ 0.7
RPA3P35244 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RPA3P35244 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.4■□□□□ 0.7
RPA3P35244 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPA3P35244 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.4■□□□□ 0.7
RPA3P35244 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.4■□□□□ 0.7
RPA3P35244 AC092368.3-202ENST00000574180 1591 ntBASIC19.4■□□□□ 0.7
RPA3P35244 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.4■□□□□ 0.7
RPA3P35244 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.39■□□□□ 0.7
RPA3P35244 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPA3P35244 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.39■□□□□ 0.7
RPA3P35244 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RPA3P35244 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.39■□□□□ 0.69
RPA3P35244 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPA3P35244 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.39■□□□□ 0.69
RPA3P35244 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.39■□□□□ 0.69
RPA3P35244 AC060766.5-201ENST00000590539 871 ntBASIC19.39■□□□□ 0.69
RPA3P35244 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RPA3P35244 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RPA3P35244 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms