Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PTPN6P29350 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN6P29350 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTPN6P29350 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN6P29350 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN6P29350 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN6P29350 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PTPN6P29350 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 KRT17P3-201ENST00000420566 1262 ntBASIC18.24■□□□□ 0.51
PTPN6P29350 POM121L13P-201ENST00000422362 380 ntBASIC18.24■□□□□ 0.51
PTPN6P29350 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN6P29350 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN6P29350 AC120498.8-201ENST00000614275 531 ntBASIC18.24■□□□□ 0.51
PTPN6P29350 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN6P29350 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN6P29350 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN6P29350 AL031598.1-201ENST00000561511 1773 ntBASIC18.24■□□□□ 0.51
PTPN6P29350 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN6P29350 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN6P29350 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
PTPN6P29350 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN6P29350 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN6P29350 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN6P29350 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN6P29350 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN6P29350 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN6P29350 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.23■□□□□ 0.51
PTPN6P29350 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN6P29350 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
PTPN6P29350 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN6P29350 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN6P29350 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN6P29350 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN6P29350 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN6P29350 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.23■□□□□ 0.51
PTPN6P29350 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN6P29350 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.23■□□□□ 0.51
PTPN6P29350 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PTPN6P29350 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTPN6P29350 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PTPN6P29350 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPN6P29350 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPN6P29350 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPN6P29350 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN6P29350 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPN6P29350 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN6P29350 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPN6P29350 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPN6P29350 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPN6P29350 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 KRT8P8-201ENST00000434750 1448 ntBASIC18.22■□□□□ 0.51
PTPN6P29350 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPN6P29350 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPN6P29350 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPN6P29350 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPN6P29350 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN6P29350 AC093525.10-201ENST00000625130 1569 ntBASIC18.21■□□□□ 0.51
PTPN6P29350 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN6P29350 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN6P29350 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN6P29350 YBX1P10-201ENST00000444752 975 ntBASIC18.21■□□□□ 0.51
PTPN6P29350 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms