Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.63■■□□□ 1.37
KCNA3P22001 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNA3P22001 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNA3P22001 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNA3P22001 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
KCNA3P22001 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KCNA3P22001 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
KCNA3P22001 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
KCNA3P22001 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.62■■□□□ 1.37
KCNA3P22001 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KCNA3P22001 LINC00265-3P-201ENST00000447588 903 ntBASIC23.62■■□□□ 1.37
KCNA3P22001 KRT16P4-201ENST00000453883 522 ntBASIC23.62■■□□□ 1.37
KCNA3P22001 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
KCNA3P22001 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.62■■□□□ 1.37
KCNA3P22001 AC012615.1-201ENST00000565797 1299 ntBASIC23.62■■□□□ 1.37
KCNA3P22001 RNF126P1-202ENST00000569893 925 ntBASIC23.62■■□□□ 1.37
KCNA3P22001 AL121912.1-201ENST00000603683 238 ntBASIC23.62■■□□□ 1.37
KCNA3P22001 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KCNA3P22001 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
KCNA3P22001 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KCNA3P22001 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
KCNA3P22001 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNA3P22001 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.61■■□□□ 1.37
KCNA3P22001 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.61■■□□□ 1.37
KCNA3P22001 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNA3P22001 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNA3P22001 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KCNA3P22001 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.61■■□□□ 1.37
KCNA3P22001 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC23.61■■□□□ 1.37
KCNA3P22001 TSPY12P-201ENST00000421279 868 ntBASIC23.61■■□□□ 1.37
KCNA3P22001 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.61■■□□□ 1.37
KCNA3P22001 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.61■■□□□ 1.37
KCNA3P22001 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.61■■□□□ 1.37
KCNA3P22001 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KCNA3P22001 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KCNA3P22001 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KCNA3P22001 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
KCNA3P22001 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNA3P22001 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KCNA3P22001 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.6■■□□□ 1.37
KCNA3P22001 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.6■■□□□ 1.37
KCNA3P22001 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNA3P22001 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.6■■□□□ 1.37
KCNA3P22001 SEC1P-202ENST00000473944 940 ntBASIC23.6■■□□□ 1.37
KCNA3P22001 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.6■■□□□ 1.37
KCNA3P22001 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.6■■□□□ 1.37
KCNA3P22001 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
KCNA3P22001 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNA3P22001 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.6■■□□□ 1.37
KCNA3P22001 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNA3P22001 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNA3P22001 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KCNA3P22001 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
KCNA3P22001 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KCNA3P22001 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.59■■□□□ 1.37
KCNA3P22001 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.59■■□□□ 1.37
KCNA3P22001 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.59■■□□□ 1.37
KCNA3P22001 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
KCNA3P22001 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
KCNA3P22001 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.59■■□□□ 1.37
KCNA3P22001 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.59■■□□□ 1.37
KCNA3P22001 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC23.59■■□□□ 1.37
KCNA3P22001 TOB2P1-201ENST00000469761 992 ntBASIC23.59■■□□□ 1.37
KCNA3P22001 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
KCNA3P22001 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.59■■□□□ 1.37
KCNA3P22001 AC120114.3-201ENST00000611923 658 ntBASIC23.59■■□□□ 1.37
KCNA3P22001 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 GPAT2P1-201ENST00000444924 1672 ntBASIC23.59■■□□□ 1.37
KCNA3P22001 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.59■■□□□ 1.37
KCNA3P22001 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNA3P22001 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KCNA3P22001 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.58■■□□□ 1.37
KCNA3P22001 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.58■■□□□ 1.37
KCNA3P22001 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
KCNA3P22001 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.58■■□□□ 1.37
KCNA3P22001 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KCNA3P22001 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
KCNA3P22001 MIR574-201ENST00000385209 96 ntBASIC23.58■■□□□ 1.37
KCNA3P22001 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
KCNA3P22001 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
KCNA3P22001 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
KCNA3P22001 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
KCNA3P22001 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
KCNA3P22001 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
KCNA3P22001 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.58■■□□□ 1.36
KCNA3P22001 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
KCNA3P22001 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.57■■□□□ 1.36
KCNA3P22001 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms