Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
NFKB1P19838 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.56■□□□□ 0.72
NFKB1P19838 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NFKB1P19838 AL359736.2-201ENST00000621992 437 ntBASIC19.56■□□□□ 0.72
NFKB1P19838 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.56■□□□□ 0.72
NFKB1P19838 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.56■□□□□ 0.72
NFKB1P19838 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.56■□□□□ 0.72
NFKB1P19838 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
NFKB1P19838 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFKB1P19838 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NFKB1P19838 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
NFKB1P19838 PRORSD1P-201ENST00000295112 541 ntBASIC19.55■□□□□ 0.72
NFKB1P19838 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.55■□□□□ 0.72
NFKB1P19838 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.55■□□□□ 0.72
NFKB1P19838 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.55■□□□□ 0.72
NFKB1P19838 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.55■□□□□ 0.72
NFKB1P19838 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NFKB1P19838 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFKB1P19838 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.55■□□□□ 0.72
NFKB1P19838 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NFKB1P19838 HTR7P1-201ENST00000538670 1336 ntBASIC19.54■□□□□ 0.72
NFKB1P19838 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.54■□□□□ 0.72
NFKB1P19838 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.54■□□□□ 0.72
NFKB1P19838 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NFKB1P19838 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NFKB1P19838 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.54■□□□□ 0.72
NFKB1P19838 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.54■□□□□ 0.72
NFKB1P19838 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NFKB1P19838 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NFKB1P19838 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NFKB1P19838 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NFKB1P19838 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
NFKB1P19838 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NFKB1P19838 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.53■□□□□ 0.72
NFKB1P19838 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.53■□□□□ 0.72
NFKB1P19838 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NFKB1P19838 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
NFKB1P19838 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.53■□□□□ 0.72
NFKB1P19838 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NFKB1P19838 TNXA-203ENST00000507684 2038 ntBASIC19.53■□□□□ 0.72
NFKB1P19838 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.53■□□□□ 0.72
NFKB1P19838 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.53■□□□□ 0.72
NFKB1P19838 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.53■□□□□ 0.72
NFKB1P19838 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.53■□□□□ 0.72
NFKB1P19838 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.53■□□□□ 0.72
NFKB1P19838 FAM197Y4-202ENST00000622692 608 ntBASIC19.53■□□□□ 0.72
NFKB1P19838 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.53■□□□□ 0.72
NFKB1P19838 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NFKB1P19838 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NFKB1P19838 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NFKB1P19838 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NFKB1P19838 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.53■□□□□ 0.72
NFKB1P19838 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NFKB1P19838 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NFKB1P19838 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NFKB1P19838 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.52■□□□□ 0.72
NFKB1P19838 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.52■□□□□ 0.72
NFKB1P19838 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms