Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATF4P18848 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATF4P18848 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.06■□□□□ 0.16
ATF4P18848 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ATF4P18848 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.06■□□□□ 0.16
ATF4P18848 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.06■□□□□ 0.16
ATF4P18848 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.06■□□□□ 0.16
ATF4P18848 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.06■□□□□ 0.16
ATF4P18848 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.06■□□□□ 0.16
ATF4P18848 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATF4P18848 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATF4P18848 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.05■□□□□ 0.16
ATF4P18848 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.05■□□□□ 0.16
ATF4P18848 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 MKRN4P-201ENST00000444706 1521 ntBASIC16.05■□□□□ 0.16
ATF4P18848 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.05■□□□□ 0.16
ATF4P18848 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.05■□□□□ 0.16
ATF4P18848 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.05■□□□□ 0.16
ATF4P18848 IGHV3-19-201ENST00000521488 291 ntBASIC16.05■□□□□ 0.16
ATF4P18848 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.05■□□□□ 0.16
ATF4P18848 AC092666.2-201ENST00000613287 246 ntBASIC16.05■□□□□ 0.16
ATF4P18848 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ATF4P18848 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATF4P18848 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ATF4P18848 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
ATF4P18848 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.04■□□□□ 0.16
ATF4P18848 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.04■□□□□ 0.16
ATF4P18848 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.04■□□□□ 0.16
ATF4P18848 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 AC009237.3-201ENST00000393279 1427 ntBASIC16.04■□□□□ 0.16
ATF4P18848 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ATF4P18848 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
ATF4P18848 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATF4P18848 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.04■□□□□ 0.16
ATF4P18848 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.04■□□□□ 0.16
ATF4P18848 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.04■□□□□ 0.16
ATF4P18848 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.04■□□□□ 0.16
ATF4P18848 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.04■□□□□ 0.16
ATF4P18848 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.04■□□□□ 0.16
ATF4P18848 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.04■□□□□ 0.16
ATF4P18848 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATF4P18848 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.04■□□□□ 0.16
ATF4P18848 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms