Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ATF1P18846 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ATF1P18846 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.88■□□□□ 0.29
ATF1P18846 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.88■□□□□ 0.29
ATF1P18846 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ATF1P18846 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 AL354751.1-201ENST00000412768 1863 ntBASIC16.88■□□□□ 0.29
ATF1P18846 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ATF1P18846 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 Z98044.1-201ENST00000632503 1764 ntBASIC16.87■□□□□ 0.29
ATF1P18846 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
ATF1P18846 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATF1P18846 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 AC116351.2-201ENST00000606540 1585 ntBASIC16.87■□□□□ 0.29
ATF1P18846 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 BX276092.2-201ENST00000417668 665 ntBASIC16.87■□□□□ 0.29
ATF1P18846 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.87■□□□□ 0.29
ATF1P18846 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 AC092437.1-201ENST00000624794 1048 ntBASIC16.87■□□□□ 0.29
ATF1P18846 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.87■□□□□ 0.29
ATF1P18846 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF1P18846 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF1P18846 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.87■□□□□ 0.29
ATF1P18846 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.86■□□□□ 0.29
ATF1P18846 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF1P18846 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATF1P18846 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATF1P18846 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ATF1P18846 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF1P18846 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF1P18846 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF1P18846 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATF1P18846 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.86■□□□□ 0.29
ATF1P18846 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF1P18846 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF1P18846 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.86■□□□□ 0.29
ATF1P18846 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF1P18846 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF1P18846 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.86■□□□□ 0.29
ATF1P18846 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.86■□□□□ 0.29
ATF1P18846 AL050303.2-201ENST00000619798 666 ntBASIC16.86■□□□□ 0.29
ATF1P18846 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF1P18846 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF1P18846 NOC2LP1-202ENST00000452600 2235 ntBASIC16.86■□□□□ 0.29
ATF1P18846 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF1P18846 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATF1P18846 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATF1P18846 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF1P18846 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ATF1P18846 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF1P18846 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATF1P18846 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.85■□□□□ 0.29
ATF1P18846 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.85■□□□□ 0.29
ATF1P18846 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ATF1P18846 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF1P18846 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ATF1P18846 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.85■□□□□ 0.29
ATF1P18846 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF1P18846 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms