Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGA1P17096 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.99■□□□□ 0.79
HMGA1P17096 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.99■□□□□ 0.79
HMGA1P17096 AL512604.3-201ENST00000569583 964 ntBASIC19.99■□□□□ 0.79
HMGA1P17096 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HMGA1P17096 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGA1P17096 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HMGA1P17096 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGA1P17096 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGA1P17096 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGA1P17096 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGA1P17096 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGA1P17096 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGA1P17096 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
HMGA1P17096 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 TSPY5P-201ENST00000426936 936 ntBASIC19.98■□□□□ 0.79
HMGA1P17096 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
HMGA1P17096 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.98■□□□□ 0.79
HMGA1P17096 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGA1P17096 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGA1P17096 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGA1P17096 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.98■□□□□ 0.79
HMGA1P17096 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
HMGA1P17096 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGA1P17096 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGA1P17096 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
HMGA1P17096 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
HMGA1P17096 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGA1P17096 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA1P17096 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
HMGA1P17096 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HMGA1P17096 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGA1P17096 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGA1P17096 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
HMGA1P17096 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 AC087388.1-201ENST00000571370 1112 ntBASIC19.97■□□□□ 0.79
HMGA1P17096 MIR4674-201ENST00000582457 87 ntBASIC19.97■□□□□ 0.79
HMGA1P17096 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.97■□□□□ 0.79
HMGA1P17096 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
HMGA1P17096 MYC-208ENST00000641036 567 ntBASIC19.97■□□□□ 0.79
HMGA1P17096 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGA1P17096 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
HMGA1P17096 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGA1P17096 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA1P17096 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGA1P17096 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HMGA1P17096 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGA1P17096 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGA1P17096 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGA1P17096 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGA1P17096 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGA1P17096 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGA1P17096 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGA1P17096 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGA1P17096 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
HMGA1P17096 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGA1P17096 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA1P17096 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGA1P17096 PCDHAC2-203ENST00000615316 3011 ntBASIC19.95■□□□□ 0.78
HMGA1P17096 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGA1P17096 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGA1P17096 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
HMGA1P17096 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGA1P17096 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms