Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC25.38■■□□□ 1.65
COL5A2P05997 AC079781.3-201ENST00000449110 356 ntBASIC25.38■■□□□ 1.65
COL5A2P05997 EMBP1-201ENST00000458200 901 ntBASIC25.38■■□□□ 1.65
COL5A2P05997 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
COL5A2P05997 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL5A2P05997 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25.38■■□□□ 1.65
COL5A2P05997 AC133561.1-201ENST00000568600 2415 ntBASIC25.38■■□□□ 1.65
COL5A2P05997 KRT18P1-202ENST00000452408 1331 ntBASIC25.38■■□□□ 1.65
COL5A2P05997 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL5A2P05997 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC25.38■■□□□ 1.65
COL5A2P05997 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL5A2P05997 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL5A2P05997 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.37■■□□□ 1.65
COL5A2P05997 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
COL5A2P05997 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC25.37■■□□□ 1.65
COL5A2P05997 AC104417.2-201ENST00000562989 1793 ntBASIC25.37■■□□□ 1.65
COL5A2P05997 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 TSPY19P-201ENST00000418461 509 ntBASIC25.37■■□□□ 1.65
COL5A2P05997 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC25.37■■□□□ 1.65
COL5A2P05997 TSPY18P-201ENST00000441642 509 ntBASIC25.37■■□□□ 1.65
COL5A2P05997 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC25.37■■□□□ 1.65
COL5A2P05997 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.37■■□□□ 1.65
COL5A2P05997 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC25.37■■□□□ 1.65
COL5A2P05997 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.37■■□□□ 1.65
COL5A2P05997 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
COL5A2P05997 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL5A2P05997 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL5A2P05997 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
COL5A2P05997 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC25.36■■□□□ 1.65
COL5A2P05997 MPI-205ENST00000562606 1052 ntTSL 3 BASIC25.36■■□□□ 1.65
COL5A2P05997 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC25.36■■□□□ 1.65
COL5A2P05997 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC25.36■■□□□ 1.65
COL5A2P05997 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL5A2P05997 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC25.36■■□□□ 1.65
COL5A2P05997 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL5A2P05997 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
COL5A2P05997 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.36■■□□□ 1.65
COL5A2P05997 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL5A2P05997 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL5A2P05997 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
COL5A2P05997 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.36■■□□□ 1.65
COL5A2P05997 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
COL5A2P05997 AL022342.1-201ENST00000400363 863 ntBASIC25.35■■□□□ 1.65
COL5A2P05997 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL5A2P05997 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
COL5A2P05997 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC25.35■■□□□ 1.65
COL5A2P05997 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL5A2P05997 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL5A2P05997 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
COL5A2P05997 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC25.35■■□□□ 1.65
COL5A2P05997 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL5A2P05997 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC25.35■■□□□ 1.65
COL5A2P05997 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL5A2P05997 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.35■■□□□ 1.65
COL5A2P05997 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.35■■□□□ 1.65
COL5A2P05997 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL5A2P05997 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL5A2P05997 AC020907.5-201ENST00000624372 1936 ntBASIC25.35■■□□□ 1.65
COL5A2P05997 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC25.35■■□□□ 1.65
COL5A2P05997 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL5A2P05997 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC25.34■■□□□ 1.65
COL5A2P05997 SPEG-225ENST00000617028 815 ntTSL 5 BASIC25.34■■□□□ 1.65
COL5A2P05997 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL5A2P05997 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL5A2P05997 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL5A2P05997 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL5A2P05997 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC25.34■■□□□ 1.65
COL5A2P05997 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC25.34■■□□□ 1.65
COL5A2P05997 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC25.34■■□□□ 1.65
COL5A2P05997 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL5A2P05997 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC25.34■■□□□ 1.65
COL5A2P05997 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
COL5A2P05997 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL5A2P05997 CIB2-208ENST00000560618 804 ntTSL 2 BASIC25.34■■□□□ 1.65
COL5A2P05997 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
COL5A2P05997 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC25.34■■□□□ 1.65
COL5A2P05997 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL5A2P05997 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL5A2P05997 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL5A2P05997 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL5A2P05997 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL5A2P05997 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL5A2P05997 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC25.33■■□□□ 1.65
COL5A2P05997 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC25.33■■□□□ 1.65
COL5A2P05997 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL5A2P05997 DRAXINP1-201ENST00000437611 948 ntBASIC25.33■■□□□ 1.65
COL5A2P05997 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
COL5A2P05997 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL5A2P05997 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.32■■□□□ 1.64
COL5A2P05997 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms