Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPB1P04440 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPB1P04440 AC005332.8-201ENST00000622750 2735 ntBASIC17.29■□□□□ 0.36
HLA-DPB1P04440 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPB1P04440 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPB1P04440 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPB1P04440 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DPB1P04440 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DPB1P04440 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPB1P04440 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DPB1P04440 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 GUSBP6-202ENST00000438529 1198 ntBASIC17.28■□□□□ 0.36
HLA-DPB1P04440 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 AC090164.3-201ENST00000610780 2143 ntBASIC17.28■□□□□ 0.36
HLA-DPB1P04440 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPB1P04440 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HLA-DPB1P04440 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DPB1P04440 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DPB1P04440 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DPB1P04440 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DPB1P04440 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
HLA-DPB1P04440 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.27■□□□□ 0.35
HLA-DPB1P04440 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DPB1P04440 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HLA-DPB1P04440 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 AC141586.3-201ENST00000562166 1838 ntBASIC17.26■□□□□ 0.35
HLA-DPB1P04440 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 PHGDH-210ENST00000641115 1638 ntBASIC17.26■□□□□ 0.35
HLA-DPB1P04440 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DPB1P04440 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPB1P04440 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms