Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CLPTM1O96005 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLPTM1O96005 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLPTM1O96005 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLPTM1O96005 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.1■□□□□ 0.49
CLPTM1O96005 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.1■□□□□ 0.49
CLPTM1O96005 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLPTM1O96005 AC010141.2-201ENST00000452426 721 ntBASIC18.1■□□□□ 0.49
CLPTM1O96005 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.1■□□□□ 0.49
CLPTM1O96005 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.1■□□□□ 0.49
CLPTM1O96005 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLPTM1O96005 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLPTM1O96005 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLPTM1O96005 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLPTM1O96005 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.09■□□□□ 0.49
CLPTM1O96005 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.09■□□□□ 0.49
CLPTM1O96005 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLPTM1O96005 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLPTM1O96005 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.09■□□□□ 0.49
CLPTM1O96005 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 AC006015.1-201ENST00000429970 570 ntBASIC18.09■□□□□ 0.49
CLPTM1O96005 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.09■□□□□ 0.49
CLPTM1O96005 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.09■□□□□ 0.49
CLPTM1O96005 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.09■□□□□ 0.49
CLPTM1O96005 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.09■□□□□ 0.49
CLPTM1O96005 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLPTM1O96005 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CLPTM1O96005 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLPTM1O96005 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.09■□□□□ 0.49
CLPTM1O96005 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.09■□□□□ 0.49
CLPTM1O96005 Z98044.1-201ENST00000632503 1764 ntBASIC18.09■□□□□ 0.49
CLPTM1O96005 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.09■□□□□ 0.49
CLPTM1O96005 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.09■□□□□ 0.49
CLPTM1O96005 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CLPTM1O96005 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLPTM1O96005 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLPTM1O96005 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLPTM1O96005 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.08■□□□□ 0.49
CLPTM1O96005 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLPTM1O96005 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLPTM1O96005 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CLPTM1O96005 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLPTM1O96005 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLPTM1O96005 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.08■□□□□ 0.48
CLPTM1O96005 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.08■□□□□ 0.48
CLPTM1O96005 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.08■□□□□ 0.48
CLPTM1O96005 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
CLPTM1O96005 UBE2DNL-204ENST00000602536 740 ntBASIC18.08■□□□□ 0.48
CLPTM1O96005 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.08■□□□□ 0.48
CLPTM1O96005 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.08■□□□□ 0.48
CLPTM1O96005 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.08■□□□□ 0.48
CLPTM1O96005 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.08■□□□□ 0.48
CLPTM1O96005 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CLPTM1O96005 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CLPTM1O96005 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLPTM1O96005 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.08■□□□□ 0.48
CLPTM1O96005 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLPTM1O96005 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms