Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.22■□□□□ 0.83
BEST1O76090 TSPY23P-201ENST00000440136 739 ntBASIC20.22■□□□□ 0.83
BEST1O76090 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
BEST1O76090 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.22■□□□□ 0.83
BEST1O76090 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BEST1O76090 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.22■□□□□ 0.83
BEST1O76090 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.22■□□□□ 0.83
BEST1O76090 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BEST1O76090 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.21■□□□□ 0.83
BEST1O76090 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BEST1O76090 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BEST1O76090 INGX-201ENST00000359239 846 ntBASIC20.21■□□□□ 0.83
BEST1O76090 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.21■□□□□ 0.83
BEST1O76090 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.21■□□□□ 0.83
BEST1O76090 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.21■□□□□ 0.83
BEST1O76090 AC097493.4-201ENST00000641197 219 ntBASIC20.21■□□□□ 0.83
BEST1O76090 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BEST1O76090 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
BEST1O76090 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BEST1O76090 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
BEST1O76090 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BEST1O76090 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BEST1O76090 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BEST1O76090 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.2■□□□□ 0.82
BEST1O76090 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
BEST1O76090 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.2■□□□□ 0.82
BEST1O76090 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.2■□□□□ 0.82
BEST1O76090 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.2■□□□□ 0.82
BEST1O76090 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.2■□□□□ 0.82
BEST1O76090 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.2■□□□□ 0.82
BEST1O76090 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.2■□□□□ 0.82
BEST1O76090 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.2■□□□□ 0.82
BEST1O76090 CKBP1-201ENST00000565489 1086 ntBASIC20.2■□□□□ 0.82
BEST1O76090 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
BEST1O76090 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.2■□□□□ 0.82
BEST1O76090 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.2■□□□□ 0.82
BEST1O76090 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.2■□□□□ 0.82
BEST1O76090 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST1O76090 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.2■□□□□ 0.82
BEST1O76090 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST1O76090 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST1O76090 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.19■□□□□ 0.82
BEST1O76090 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
BEST1O76090 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
BEST1O76090 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BEST1O76090 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
BEST1O76090 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST1O76090 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
BEST1O76090 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.19■□□□□ 0.82
BEST1O76090 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BEST1O76090 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
BEST1O76090 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
BEST1O76090 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
BEST1O76090 NAPSB-206ENST00000562112 1266 ntBASIC20.19■□□□□ 0.82
BEST1O76090 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST1O76090 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.19■□□□□ 0.82
BEST1O76090 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.19■□□□□ 0.82
BEST1O76090 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.19■□□□□ 0.82
BEST1O76090 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
BEST1O76090 TEX21P-204ENST00000641479 1693 ntBASIC20.19■□□□□ 0.82
BEST1O76090 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST1O76090 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.18■□□□□ 0.82
BEST1O76090 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BEST1O76090 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.18■□□□□ 0.82
BEST1O76090 AL032819.2-201ENST00000624543 2162 ntBASIC20.18■□□□□ 0.82
BEST1O76090 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.18■□□□□ 0.82
BEST1O76090 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.18■□□□□ 0.82
BEST1O76090 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.18■□□□□ 0.82
BEST1O76090 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.18■□□□□ 0.82
BEST1O76090 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.18■□□□□ 0.82
BEST1O76090 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BEST1O76090 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.18■□□□□ 0.82
BEST1O76090 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.18■□□□□ 0.82
BEST1O76090 LINC01023-201ENST00000606054 436 ntBASIC20.18■□□□□ 0.82
BEST1O76090 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms