Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A3O75365 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A3O75365 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.33■□□□□ 0.37
PTP4A3O75365 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A3O75365 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.33■□□□□ 0.37
PTP4A3O75365 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A3O75365 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A3O75365 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PTP4A3O75365 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A3O75365 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTP4A3O75365 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.33■□□□□ 0.36
PTP4A3O75365 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.33■□□□□ 0.36
PTP4A3O75365 UNC93B4-201ENST00000505679 747 ntBASIC17.33■□□□□ 0.36
PTP4A3O75365 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.33■□□□□ 0.36
PTP4A3O75365 AC142086.2-201ENST00000569753 217 ntBASIC17.33■□□□□ 0.36
PTP4A3O75365 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.33■□□□□ 0.36
PTP4A3O75365 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.33■□□□□ 0.36
PTP4A3O75365 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PTP4A3O75365 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A3O75365 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PTP4A3O75365 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTP4A3O75365 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PTP4A3O75365 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.32■□□□□ 0.36
PTP4A3O75365 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A3O75365 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PTP4A3O75365 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.32■□□□□ 0.36
PTP4A3O75365 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
PTP4A3O75365 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PTP4A3O75365 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A3O75365 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.32■□□□□ 0.36
PTP4A3O75365 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A3O75365 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.32■□□□□ 0.36
PTP4A3O75365 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.32■□□□□ 0.36
PTP4A3O75365 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTP4A3O75365 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.32■□□□□ 0.36
PTP4A3O75365 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A3O75365 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.32■□□□□ 0.36
PTP4A3O75365 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A3O75365 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A3O75365 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.32■□□□□ 0.36
PTP4A3O75365 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PTP4A3O75365 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTP4A3O75365 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.31■□□□□ 0.36
PTP4A3O75365 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.31■□□□□ 0.36
PTP4A3O75365 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.31■□□□□ 0.36
PTP4A3O75365 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PTP4A3O75365 Z98044.1-201ENST00000632503 1764 ntBASIC17.31■□□□□ 0.36
PTP4A3O75365 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 AC120498.9-201ENST00000339021 3867 ntBASIC17.31■□□□□ 0.36
PTP4A3O75365 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.31■□□□□ 0.36
PTP4A3O75365 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.31■□□□□ 0.36
PTP4A3O75365 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
PTP4A3O75365 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A3O75365 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PTP4A3O75365 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.31■□□□□ 0.36
PTP4A3O75365 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTP4A3O75365 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
PTP4A3O75365 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PTP4A3O75365 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTP4A3O75365 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PTP4A3O75365 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.3■□□□□ 0.36
PTP4A3O75365 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTP4A3O75365 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A3O75365 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.3■□□□□ 0.36
PTP4A3O75365 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.3■□□□□ 0.36
PTP4A3O75365 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.3■□□□□ 0.36
PTP4A3O75365 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms