Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.11■□□□□ 0.49
PLOD3O60568 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.11■□□□□ 0.49
PLOD3O60568 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PLOD3O60568 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PLOD3O60568 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.11■□□□□ 0.49
PLOD3O60568 C1QL1P1-201ENST00000568105 661 ntBASIC18.11■□□□□ 0.49
PLOD3O60568 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.11■□□□□ 0.49
PLOD3O60568 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.11■□□□□ 0.49
PLOD3O60568 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.11■□□□□ 0.49
PLOD3O60568 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PLOD3O60568 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PLOD3O60568 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.11■□□□□ 0.49
PLOD3O60568 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PLOD3O60568 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PLOD3O60568 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.1■□□□□ 0.49
PLOD3O60568 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PLOD3O60568 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PLOD3O60568 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.1■□□□□ 0.49
PLOD3O60568 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PLOD3O60568 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.1■□□□□ 0.49
PLOD3O60568 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PLOD3O60568 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PLOD3O60568 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PLOD3O60568 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PLOD3O60568 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PLOD3O60568 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PLOD3O60568 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.1■□□□□ 0.49
PLOD3O60568 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.1■□□□□ 0.49
PLOD3O60568 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PLOD3O60568 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PLOD3O60568 AC104417.2-201ENST00000562989 1793 ntBASIC18.09■□□□□ 0.49
PLOD3O60568 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PLOD3O60568 AC090340.1-201ENST00000620778 4980 ntBASIC18.09■□□□□ 0.49
PLOD3O60568 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PLOD3O60568 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PLOD3O60568 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PLOD3O60568 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PLOD3O60568 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PLOD3O60568 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.09■□□□□ 0.49
PLOD3O60568 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PLOD3O60568 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.09■□□□□ 0.49
PLOD3O60568 AL032819.2-201ENST00000624543 2162 ntBASIC18.09■□□□□ 0.49
PLOD3O60568 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.09■□□□□ 0.49
PLOD3O60568 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PLOD3O60568 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PLOD3O60568 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.09■□□□□ 0.49
PLOD3O60568 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.09■□□□□ 0.49
PLOD3O60568 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.09■□□□□ 0.49
PLOD3O60568 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PLOD3O60568 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PLOD3O60568 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PLOD3O60568 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PLOD3O60568 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PLOD3O60568 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.09■□□□□ 0.49
PLOD3O60568 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PLOD3O60568 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PLOD3O60568 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PLOD3O60568 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PLOD3O60568 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PLOD3O60568 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.09■□□□□ 0.49
PLOD3O60568 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.09■□□□□ 0.49
PLOD3O60568 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PLOD3O60568 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PLOD3O60568 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PLOD3O60568 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PLOD3O60568 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PLOD3O60568 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.08■□□□□ 0.49
PLOD3O60568 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PLOD3O60568 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PLOD3O60568 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PLOD3O60568 AC098818.2-201ENST00000564925 2320 ntBASIC18.08■□□□□ 0.48
PLOD3O60568 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PLOD3O60568 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms