Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SNX3O60493 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.96■□□□□ 0.63
SNX3O60493 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 AC073592.3-201ENST00000625118 1834 ntBASIC18.96■□□□□ 0.63
SNX3O60493 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.96■□□□□ 0.63
SNX3O60493 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.96■□□□□ 0.63
SNX3O60493 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
SNX3O60493 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.96■□□□□ 0.63
SNX3O60493 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SNX3O60493 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SNX3O60493 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.95■□□□□ 0.62
SNX3O60493 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX3O60493 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX3O60493 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.95■□□□□ 0.62
SNX3O60493 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX3O60493 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX3O60493 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.95■□□□□ 0.62
SNX3O60493 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX3O60493 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.95■□□□□ 0.62
SNX3O60493 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX3O60493 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX3O60493 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX3O60493 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX3O60493 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SNX3O60493 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SNX3O60493 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.94■□□□□ 0.62
SNX3O60493 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.94■□□□□ 0.62
SNX3O60493 YBX1P1-201ENST00000445822 960 ntBASIC18.94■□□□□ 0.62
SNX3O60493 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.94■□□□□ 0.62
SNX3O60493 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNX3O60493 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SNX3O60493 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 AC126763.1-201ENST00000552015 2118 ntBASIC18.94■□□□□ 0.62
SNX3O60493 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX3O60493 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.94■□□□□ 0.62
SNX3O60493 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SNX3O60493 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
SNX3O60493 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SNX3O60493 SDHAP1-207ENST00000440850 2000 ntBASIC18.93■□□□□ 0.62
SNX3O60493 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.93■□□□□ 0.62
SNX3O60493 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.93■□□□□ 0.62
SNX3O60493 MIR6084-201ENST00000622012 110 ntBASIC18.93■□□□□ 0.62
SNX3O60493 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SNX3O60493 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SNX3O60493 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
SNX3O60493 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.93■□□□□ 0.62
SNX3O60493 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.93■□□□□ 0.62
SNX3O60493 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SNX3O60493 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SNX3O60493 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SNX3O60493 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX3O60493 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX3O60493 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX3O60493 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX3O60493 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX3O60493 AC018553.1-201ENST00000616682 1458 ntBASIC18.92■□□□□ 0.62
SNX3O60493 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX3O60493 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SNX3O60493 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms