Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 AL031133.1-201ENST00000406807 723 ntBASIC19.06■□□□□ 0.64
PCDHGA12O60330 TSPY5P-201ENST00000426936 936 ntBASIC19.06■□□□□ 0.64
PCDHGA12O60330 AC007663.1-201ENST00000438948 1240 ntBASIC19.06■□□□□ 0.64
PCDHGA12O60330 YBX1P2-201ENST00000489612 999 ntBASIC19.06■□□□□ 0.64
PCDHGA12O60330 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 AC112907.3-201ENST00000577781 2400 ntBASIC19.06■□□□□ 0.64
PCDHGA12O60330 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA12O60330 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA12O60330 AC020907.5-201ENST00000624372 1936 ntBASIC19.06■□□□□ 0.64
PCDHGA12O60330 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 COX11P1-201ENST00000489116 835 ntBASIC19.05■□□□□ 0.64
PCDHGA12O60330 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 AC092338.2-201ENST00000568827 1415 ntBASIC19.05■□□□□ 0.64
PCDHGA12O60330 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA12O60330 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA12O60330 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 AL512604.3-201ENST00000569583 964 ntBASIC19.04■□□□□ 0.64
PCDHGA12O60330 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGA12O60330 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA12O60330 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms