Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.12■□□□□ 0.49
FOXS1O43638 LINC01023-201ENST00000606054 436 ntBASIC18.12■□□□□ 0.49
FOXS1O43638 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXS1O43638 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXS1O43638 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXS1O43638 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXS1O43638 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXS1O43638 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
FOXS1O43638 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
FOXS1O43638 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
FOXS1O43638 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
FOXS1O43638 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXS1O43638 PRSS44-201ENST00000515154 1146 ntBASIC18.11■□□□□ 0.49
FOXS1O43638 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.11■□□□□ 0.49
FOXS1O43638 AC145285.6-201ENST00000604632 637 ntBASIC18.11■□□□□ 0.49
FOXS1O43638 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXS1O43638 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXS1O43638 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.11■□□□□ 0.49
FOXS1O43638 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXS1O43638 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXS1O43638 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXS1O43638 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.11■□□□□ 0.49
FOXS1O43638 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXS1O43638 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.11■□□□□ 0.49
FOXS1O43638 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FOXS1O43638 AC093484.2-201ENST00000580996 2166 ntBASIC18.11■□□□□ 0.49
FOXS1O43638 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
FOXS1O43638 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FOXS1O43638 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FOXS1O43638 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
FOXS1O43638 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXS1O43638 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.1■□□□□ 0.49
FOXS1O43638 LINC01568-207ENST00000641790 1380 ntBASIC18.1■□□□□ 0.49
FOXS1O43638 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
FOXS1O43638 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXS1O43638 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 TSPY21P-201ENST00000433481 731 ntBASIC18.1■□□□□ 0.49
FOXS1O43638 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXS1O43638 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXS1O43638 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FOXS1O43638 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.1■□□□□ 0.49
FOXS1O43638 C2orf69P3-201ENST00000565542 1120 ntBASIC18.1■□□□□ 0.49
FOXS1O43638 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
FOXS1O43638 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.1■□□□□ 0.49
FOXS1O43638 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FOXS1O43638 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.1■□□□□ 0.49
FOXS1O43638 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FOXS1O43638 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FOXS1O43638 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXS1O43638 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXS1O43638 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FOXS1O43638 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.09■□□□□ 0.49
FOXS1O43638 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXS1O43638 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
FOXS1O43638 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXS1O43638 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXS1O43638 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXS1O43638 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FOXS1O43638 TSPY14P-201ENST00000303979 915 ntBASIC18.09■□□□□ 0.49
FOXS1O43638 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXS1O43638 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
FOXS1O43638 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXS1O43638 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FOXS1O43638 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.09■□□□□ 0.49
FOXS1O43638 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms