Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SGCEO43556 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SGCEO43556 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.99■□□□□ 0.31
SGCEO43556 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SGCEO43556 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SGCEO43556 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SGCEO43556 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SGCEO43556 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SGCEO43556 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.98■□□□□ 0.31
SGCEO43556 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.98■□□□□ 0.31
SGCEO43556 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
SGCEO43556 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 AL032819.2-201ENST00000624543 2162 ntBASIC16.98■□□□□ 0.31
SGCEO43556 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.98■□□□□ 0.31
SGCEO43556 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.98■□□□□ 0.31
SGCEO43556 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 AC004264.1-201ENST00000608354 794 ntBASIC16.98■□□□□ 0.31
SGCEO43556 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.98■□□□□ 0.31
SGCEO43556 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.98■□□□□ 0.31
SGCEO43556 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.98■□□□□ 0.31
SGCEO43556 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.98■□□□□ 0.31
SGCEO43556 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SGCEO43556 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SGCEO43556 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SGCEO43556 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.97■□□□□ 0.31
SGCEO43556 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.97■□□□□ 0.31
SGCEO43556 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SGCEO43556 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.97■□□□□ 0.31
SGCEO43556 AC239809.2-201ENST00000415381 517 ntBASIC16.97■□□□□ 0.31
SGCEO43556 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.97■□□□□ 0.31
SGCEO43556 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.97■□□□□ 0.31
SGCEO43556 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.97■□□□□ 0.31
SGCEO43556 AC006058.3-201ENST00000606217 1069 ntBASIC16.97■□□□□ 0.31
SGCEO43556 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SGCEO43556 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SGCEO43556 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SGCEO43556 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SGCEO43556 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
SGCEO43556 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.97■□□□□ 0.31
SGCEO43556 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.96■□□□□ 0.31
SGCEO43556 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SGCEO43556 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SGCEO43556 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SGCEO43556 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SGCEO43556 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SGCEO43556 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SGCEO43556 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.96■□□□□ 0.31
SGCEO43556 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.96■□□□□ 0.31
SGCEO43556 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.96■□□□□ 0.31
SGCEO43556 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.96■□□□□ 0.31
SGCEO43556 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.96■□□□□ 0.31
SGCEO43556 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.96■□□□□ 0.31
SGCEO43556 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.96■□□□□ 0.31
SGCEO43556 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.96■□□□□ 0.31
SGCEO43556 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.96■□□□□ 0.31
SGCEO43556 AL023875.1-201ENST00000640777 796 ntBASIC16.96■□□□□ 0.31
SGCEO43556 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.96■□□□□ 0.31
SGCEO43556 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SGCEO43556 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.96■□□□□ 0.31
SGCEO43556 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SGCEO43556 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SGCEO43556 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms