Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PER1O15534 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
PER1O15534 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC26.17■■□□□ 1.78
PER1O15534 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC26.17■■□□□ 1.78
PER1O15534 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PER1O15534 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.17■■□□□ 1.78
PER1O15534 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.17■■□□□ 1.78
PER1O15534 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PER1O15534 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PER1O15534 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC26.17■■□□□ 1.78
PER1O15534 AC097488.1-201ENST00000507834 756 ntBASIC26.17■■□□□ 1.78
PER1O15534 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.17■■□□□ 1.78
PER1O15534 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.17■■□□□ 1.78
PER1O15534 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PER1O15534 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PER1O15534 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC26.17■■□□□ 1.78
PER1O15534 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PER1O15534 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PER1O15534 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PER1O15534 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PER1O15534 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PER1O15534 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC26.16■■□□□ 1.78
PER1O15534 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PER1O15534 FP475955.4-201ENST00000623131 1990 ntBASIC26.16■■□□□ 1.78
PER1O15534 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC26.16■■□□□ 1.78
PER1O15534 FEM1AP3-201ENST00000403722 1741 ntBASIC26.16■■□□□ 1.78
PER1O15534 CYP2D8P-201ENST00000433633 1490 ntBASIC26.16■■□□□ 1.78
PER1O15534 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PER1O15534 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
PER1O15534 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PER1O15534 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
PER1O15534 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC26.15■■□□□ 1.78
PER1O15534 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PER1O15534 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PER1O15534 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
PER1O15534 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC26.15■■□□□ 1.78
PER1O15534 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PER1O15534 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PER1O15534 PRSS44-201ENST00000515154 1146 ntBASIC26.15■■□□□ 1.78
PER1O15534 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PER1O15534 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC26.15■■□□□ 1.78
PER1O15534 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PER1O15534 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
PER1O15534 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PER1O15534 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PER1O15534 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC26.14■■□□□ 1.78
PER1O15534 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PER1O15534 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
PER1O15534 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
PER1O15534 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PER1O15534 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC26.14■■□□□ 1.78
PER1O15534 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.14■■□□□ 1.78
PER1O15534 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.14■■□□□ 1.78
PER1O15534 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC26.14■■□□□ 1.78
PER1O15534 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PER1O15534 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC26.14■■□□□ 1.77
PER1O15534 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
PER1O15534 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PER1O15534 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC26.14■■□□□ 1.77
PER1O15534 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC26.14■■□□□ 1.77
PER1O15534 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PER1O15534 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PER1O15534 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PER1O15534 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
PER1O15534 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
PER1O15534 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PER1O15534 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PER1O15534 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PER1O15534 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PER1O15534 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC26.13■■□□□ 1.77
PER1O15534 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC26.13■■□□□ 1.77
PER1O15534 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PER1O15534 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.13■■□□□ 1.77
PER1O15534 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC26.13■■□□□ 1.77
PER1O15534 GLDC-219ENST00000640208 420 ntTSL 2 BASIC26.13■■□□□ 1.77
PER1O15534 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC26.13■■□□□ 1.77
PER1O15534 UBQLN4P1-201ENST00000461599 1801 ntBASIC26.13■■□□□ 1.77
PER1O15534 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PER1O15534 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC26.13■■□□□ 1.77
PER1O15534 AL161938.1-201ENST00000569833 2180 ntBASIC26.13■■□□□ 1.77
PER1O15534 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
PER1O15534 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PER1O15534 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PER1O15534 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC26.12■■□□□ 1.77
PER1O15534 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
PER1O15534 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PER1O15534 AL049812.1-201ENST00000432563 2267 ntBASIC26.12■■□□□ 1.77
PER1O15534 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC26.12■■□□□ 1.77
PER1O15534 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PER1O15534 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
PER1O15534 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.12■■□□□ 1.77
PER1O15534 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PER1O15534 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PER1O15534 MIR1238-201ENST00000408483 83 ntBASIC26.12■■□□□ 1.77
PER1O15534 MFAP1P1-201ENST00000442257 1255 ntBASIC26.12■■□□□ 1.77
PER1O15534 AC012306.2-201ENST00000609350 630 ntBASIC26.12■■□□□ 1.77
PER1O15534 AC010947.1-201ENST00000623454 693 ntBASIC26.12■■□□□ 1.77
PER1O15534 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC26.12■■□□□ 1.77
PER1O15534 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PER1O15534 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms