Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.44■□□□□ 0.38
SMAD9O15198 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
SMAD9O15198 KRT8P8-201ENST00000434750 1448 ntBASIC17.44■□□□□ 0.38
SMAD9O15198 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SMAD9O15198 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 HTR7P1-201ENST00000538670 1336 ntBASIC17.44■□□□□ 0.38
SMAD9O15198 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 AC090340.1-201ENST00000620778 4980 ntBASIC17.43■□□□□ 0.38
SMAD9O15198 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.43■□□□□ 0.38
SMAD9O15198 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.43■□□□□ 0.38
SMAD9O15198 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SMAD9O15198 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SMAD9O15198 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.43■□□□□ 0.38
SMAD9O15198 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.43■□□□□ 0.38
SMAD9O15198 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.43■□□□□ 0.38
SMAD9O15198 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.43■□□□□ 0.38
SMAD9O15198 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.43■□□□□ 0.38
SMAD9O15198 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.43■□□□□ 0.38
SMAD9O15198 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMAD9O15198 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SMAD9O15198 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD9O15198 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.42■□□□□ 0.38
SMAD9O15198 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.42■□□□□ 0.38
SMAD9O15198 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.42■□□□□ 0.38
SMAD9O15198 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.42■□□□□ 0.38
SMAD9O15198 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD9O15198 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD9O15198 AC008550.1-201ENST00000511500 884 ntBASIC17.42■□□□□ 0.38
SMAD9O15198 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD9O15198 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.42■□□□□ 0.38
SMAD9O15198 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.42■□□□□ 0.38
SMAD9O15198 AP006294.2-201ENST00000641667 209 ntBASIC17.42■□□□□ 0.38
SMAD9O15198 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.42■□□□□ 0.38
SMAD9O15198 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SMAD9O15198 TREX1-205ENST00000625293 1783 ntBASIC17.42■□□□□ 0.38
SMAD9O15198 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SMAD9O15198 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.42■□□□□ 0.38
SMAD9O15198 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.42■□□□□ 0.38
SMAD9O15198 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.42■□□□□ 0.38
SMAD9O15198 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SMAD9O15198 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.42■□□□□ 0.38
SMAD9O15198 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMAD9O15198 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
SMAD9O15198 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMAD9O15198 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SMAD9O15198 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms