Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.03■■□□□ 1.12
ATP2A1O14983 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP2A1O14983 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP2A1O14983 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
ATP2A1O14983 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP2A1O14983 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.02■■□□□ 1.12
ATP2A1O14983 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.02■■□□□ 1.12
ATP2A1O14983 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP2A1O14983 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.02■■□□□ 1.12
ATP2A1O14983 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP2A1O14983 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP2A1O14983 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.02■■□□□ 1.12
ATP2A1O14983 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
ATP2A1O14983 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.02■■□□□ 1.12
ATP2A1O14983 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP2A1O14983 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ATP2A1O14983 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.02■■□□□ 1.11
ATP2A1O14983 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
ATP2A1O14983 ZNF815P-204ENST00000434898 1737 ntBASIC22.01■■□□□ 1.11
ATP2A1O14983 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP2A1O14983 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
ATP2A1O14983 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP2A1O14983 HOMER2P1-201ENST00000455653 964 ntBASIC22.01■■□□□ 1.11
ATP2A1O14983 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.01■■□□□ 1.11
ATP2A1O14983 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP2A1O14983 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP2A1O14983 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP2A1O14983 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ATP2A1O14983 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP2A1O14983 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP2A1O14983 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ATP2A1O14983 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP2A1O14983 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ATP2A1O14983 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
ATP2A1O14983 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22■■□□□ 1.11
ATP2A1O14983 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ATP2A1O14983 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ATP2A1O14983 KRT8P45-201ENST00000414328 1447 ntBASIC22■■□□□ 1.11
ATP2A1O14983 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22■■□□□ 1.11
ATP2A1O14983 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22■■□□□ 1.11
ATP2A1O14983 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22■■□□□ 1.11
ATP2A1O14983 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22■■□□□ 1.11
ATP2A1O14983 AC008622.2-201ENST00000617006 1229 ntBASIC22■■□□□ 1.11
ATP2A1O14983 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22■■□□□ 1.11
ATP2A1O14983 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP2A1O14983 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22■■□□□ 1.11
ATP2A1O14983 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP2A1O14983 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP2A1O14983 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP2A1O14983 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC22■■□□□ 1.11
ATP2A1O14983 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP2A1O14983 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP2A1O14983 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
ATP2A1O14983 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP2A1O14983 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP2A1O14983 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.99■■□□□ 1.11
ATP2A1O14983 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP2A1O14983 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.99■■□□□ 1.11
ATP2A1O14983 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 AC091076.1-201ENST00000610741 619 ntBASIC21.99■■□□□ 1.11
ATP2A1O14983 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.99■■□□□ 1.11
ATP2A1O14983 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP2A1O14983 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
ATP2A1O14983 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP2A1O14983 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP2A1O14983 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP2A1O14983 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ATP2A1O14983 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP2A1O14983 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ATP2A1O14983 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ATP2A1O14983 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.98■■□□□ 1.11
ATP2A1O14983 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.98■■□□□ 1.11
ATP2A1O14983 AC092647.4-201ENST00000457211 535 ntBASIC21.98■■□□□ 1.11
ATP2A1O14983 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.98■■□□□ 1.11
ATP2A1O14983 AL441883.1-201ENST00000566170 1045 ntBASIC21.98■■□□□ 1.11
ATP2A1O14983 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP2A1O14983 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
ATP2A1O14983 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP2A1O14983 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP2A1O14983 AL358472.4-201ENST00000633140 710 ntBASIC21.98■■□□□ 1.11
ATP2A1O14983 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP2A1O14983 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms