Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.27■□□□□ 0.52
CASQ2O14958 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.27■□□□□ 0.52
CASQ2O14958 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASQ2O14958 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.27■□□□□ 0.52
CASQ2O14958 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CASQ2O14958 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CASQ2O14958 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.27■□□□□ 0.51
CASQ2O14958 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CASQ2O14958 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CASQ2O14958 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CASQ2O14958 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.27■□□□□ 0.51
CASQ2O14958 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CASQ2O14958 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CASQ2O14958 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.26■□□□□ 0.51
CASQ2O14958 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.26■□□□□ 0.51
CASQ2O14958 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CASQ2O14958 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CASQ2O14958 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.26■□□□□ 0.51
CASQ2O14958 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.26■□□□□ 0.51
CASQ2O14958 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CASQ2O14958 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.26■□□□□ 0.51
CASQ2O14958 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.26■□□□□ 0.51
CASQ2O14958 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.26■□□□□ 0.51
CASQ2O14958 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.26■□□□□ 0.51
CASQ2O14958 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.26■□□□□ 0.51
CASQ2O14958 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.26■□□□□ 0.51
CASQ2O14958 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CASQ2O14958 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.26■□□□□ 0.51
CASQ2O14958 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CASQ2O14958 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.26■□□□□ 0.51
CASQ2O14958 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASQ2O14958 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.25■□□□□ 0.51
CASQ2O14958 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CASQ2O14958 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CASQ2O14958 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.25■□□□□ 0.51
CASQ2O14958 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.25■□□□□ 0.51
CASQ2O14958 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
CASQ2O14958 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.25■□□□□ 0.51
CASQ2O14958 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CASQ2O14958 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASQ2O14958 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.25■□□□□ 0.51
CASQ2O14958 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 AC008764.6-201ENST00000595909 2069 ntBASIC18.24■□□□□ 0.51
CASQ2O14958 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.24■□□□□ 0.51
CASQ2O14958 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CASQ2O14958 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.24■□□□□ 0.51
CASQ2O14958 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.24■□□□□ 0.51
CASQ2O14958 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CASQ2O14958 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 AC233992.3-201ENST00000607491 485 ntBASIC18.24■□□□□ 0.51
CASQ2O14958 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CASQ2O14958 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.24■□□□□ 0.51
CASQ2O14958 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CASQ2O14958 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.24■□□□□ 0.51
CASQ2O14958 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.24■□□□□ 0.51
CASQ2O14958 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.24■□□□□ 0.51
CASQ2O14958 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASQ2O14958 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASQ2O14958 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms