Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN9O14815 AL353708.3-201ENST00000610272 989 ntBASIC20.31■□□□□ 0.84
CAPN9O14815 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN9O14815 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPN9O14815 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CAPN9O14815 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN9O14815 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CAPN9O14815 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN9O14815 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPN9O14815 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN9O14815 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CAPN9O14815 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CAPN9O14815 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CAPN9O14815 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.3■□□□□ 0.84
CAPN9O14815 RPS2P4-201ENST00000476944 856 ntBASIC20.3■□□□□ 0.84
CAPN9O14815 AC233702.5-201ENST00000584107 538 ntBASIC20.3■□□□□ 0.84
CAPN9O14815 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.3■□□□□ 0.84
CAPN9O14815 Z99916.2-201ENST00000604037 246 ntBASIC20.3■□□□□ 0.84
CAPN9O14815 AC073195.1-201ENST00000607241 877 ntBASIC20.3■□□□□ 0.84
CAPN9O14815 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CAPN9O14815 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CAPN9O14815 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.3■□□□□ 0.84
CAPN9O14815 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CAPN9O14815 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN9O14815 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
CAPN9O14815 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CAPN9O14815 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.29■□□□□ 0.84
CAPN9O14815 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.29■□□□□ 0.84
CAPN9O14815 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 KSR1P1-201ENST00000446298 240 ntBASIC20.29■□□□□ 0.84
CAPN9O14815 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.29■□□□□ 0.84
CAPN9O14815 HLA-A-209ENST00000638375 975 ntBASIC20.29■□□□□ 0.84
CAPN9O14815 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.29■□□□□ 0.84
CAPN9O14815 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN9O14815 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CAPN9O14815 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CAPN9O14815 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN9O14815 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN9O14815 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPN9O14815 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN9O14815 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CAPN9O14815 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CAPN9O14815 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN9O14815 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN9O14815 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPN9O14815 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.28■□□□□ 0.84
CAPN9O14815 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN9O14815 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CAPN9O14815 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPN9O14815 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CAPN9O14815 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPN9O14815 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPN9O14815 CR392000.1-201ENST00000624770 1228 ntBASIC20.28■□□□□ 0.84
CAPN9O14815 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPN9O14815 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN9O14815 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN9O14815 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPN9O14815 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPN9O14815 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CAPN9O14815 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPN9O14815 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN9O14815 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.27■□□□□ 0.84
CAPN9O14815 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPN9O14815 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN9O14815 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.27■□□□□ 0.84
CAPN9O14815 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN9O14815 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.27■□□□□ 0.84
CAPN9O14815 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPN9O14815 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN9O14815 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.27■□□□□ 0.84
CAPN9O14815 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.27■□□□□ 0.84
CAPN9O14815 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.27■□□□□ 0.84
CAPN9O14815 AL049637.2-201ENST00000641778 930 ntBASIC20.27■□□□□ 0.84
CAPN9O14815 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
CAPN9O14815 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN9O14815 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CAPN9O14815 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.27■□□□□ 0.83
CAPN9O14815 KRT16P1-201ENST00000399124 1418 ntBASIC20.27■□□□□ 0.83
CAPN9O14815 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPN9O14815 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPN9O14815 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms