Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
COPEO14579 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
COPEO14579 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 FP475955.4-201ENST00000623131 1990 ntBASIC19.24■□□□□ 0.67
COPEO14579 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.24■□□□□ 0.67
COPEO14579 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COPEO14579 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPEO14579 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.23■□□□□ 0.67
COPEO14579 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.23■□□□□ 0.67
COPEO14579 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COPEO14579 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 LSM12P1-201ENST00000411836 588 ntBASIC19.23■□□□□ 0.67
COPEO14579 AL512625.2-201ENST00000417533 625 ntBASIC19.23■□□□□ 0.67
COPEO14579 KRT18P5-201ENST00000436075 1291 ntBASIC19.23■□□□□ 0.67
COPEO14579 AC093787.1-201ENST00000450396 207 ntBASIC19.23■□□□□ 0.67
COPEO14579 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
COPEO14579 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.23■□□□□ 0.67
COPEO14579 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.23■□□□□ 0.67
COPEO14579 IRX1P1-201ENST00000438849 1838 ntBASIC19.23■□□□□ 0.67
COPEO14579 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COPEO14579 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPEO14579 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.22■□□□□ 0.67
COPEO14579 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
COPEO14579 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
COPEO14579 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.22■□□□□ 0.67
COPEO14579 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.22■□□□□ 0.67
COPEO14579 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COPEO14579 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.22■□□□□ 0.67
COPEO14579 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.22■□□□□ 0.67
COPEO14579 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COPEO14579 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPEO14579 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPEO14579 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPEO14579 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COPEO14579 AC006015.1-201ENST00000429970 570 ntBASIC19.22■□□□□ 0.67
COPEO14579 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
COPEO14579 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.22■□□□□ 0.67
COPEO14579 AC087623.3-201ENST00000607047 1098 ntBASIC19.22■□□□□ 0.67
COPEO14579 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPEO14579 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPEO14579 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COPEO14579 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPEO14579 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPEO14579 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.22■□□□□ 0.67
COPEO14579 SDHAP1-207ENST00000440850 2000 ntBASIC19.22■□□□□ 0.67
COPEO14579 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPEO14579 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
COPEO14579 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.21■□□□□ 0.67
COPEO14579 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
COPEO14579 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.21■□□□□ 0.67
COPEO14579 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.21■□□□□ 0.67
COPEO14579 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.21■□□□□ 0.67
COPEO14579 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COPEO14579 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COPEO14579 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.21■□□□□ 0.67
COPEO14579 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.21■□□□□ 0.67
COPEO14579 MIR6821-201ENST00000617625 74 ntBASIC19.21■□□□□ 0.67
COPEO14579 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
COPEO14579 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 AC104417.2-201ENST00000562989 1793 ntBASIC19.21■□□□□ 0.67
COPEO14579 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.21■□□□□ 0.67
COPEO14579 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPEO14579 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COPEO14579 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COPEO14579 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COPEO14579 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPEO14579 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.2■□□□□ 0.66
COPEO14579 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms