Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK2O00526 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.43■□□□□ 0.06
UPK2O00526 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK2O00526 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.43■□□□□ 0.06
UPK2O00526 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.43■□□□□ 0.06
UPK2O00526 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.43■□□□□ 0.06
UPK2O00526 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK2O00526 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK2O00526 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
UPK2O00526 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.43■□□□□ 0.06
UPK2O00526 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
UPK2O00526 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK2O00526 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
UPK2O00526 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK2O00526 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
UPK2O00526 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK2O00526 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK2O00526 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 AC069152.1-201ENST00000438030 544 ntBASIC15.42■□□□□ 0.06
UPK2O00526 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.42■□□□□ 0.06
UPK2O00526 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
UPK2O00526 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.42■□□□□ 0.06
UPK2O00526 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.42■□□□□ 0.06
UPK2O00526 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.42■□□□□ 0.06
UPK2O00526 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 IRX1P1-201ENST00000438849 1838 ntBASIC15.42■□□□□ 0.06
UPK2O00526 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK2O00526 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK2O00526 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
UPK2O00526 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK2O00526 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
UPK2O00526 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK2O00526 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
UPK2O00526 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK2O00526 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
UPK2O00526 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK2O00526 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
UPK2O00526 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK2O00526 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.41■□□□□ 0.06
UPK2O00526 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK2O00526 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.41■□□□□ 0.06
UPK2O00526 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.41■□□□□ 0.06
UPK2O00526 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK2O00526 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.41■□□□□ 0.06
UPK2O00526 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
UPK2O00526 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK2O00526 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
UPK2O00526 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms