Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
EIF3FO00303 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.82■□□□□ 0.6
EIF3FO00303 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
EIF3FO00303 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.82■□□□□ 0.6
EIF3FO00303 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
EIF3FO00303 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.82■□□□□ 0.6
EIF3FO00303 AC026271.3-201ENST00000571884 352 ntBASIC18.82■□□□□ 0.6
EIF3FO00303 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.82■□□□□ 0.6
EIF3FO00303 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 AC131212.4-201ENST00000623606 975 ntBASIC18.82■□□□□ 0.6
EIF3FO00303 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
EIF3FO00303 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.82■□□□□ 0.6
EIF3FO00303 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.82■□□□□ 0.6
EIF3FO00303 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EIF3FO00303 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.82■□□□□ 0.6
EIF3FO00303 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
EIF3FO00303 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.81■□□□□ 0.6
EIF3FO00303 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
EIF3FO00303 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
EIF3FO00303 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.81■□□□□ 0.6
EIF3FO00303 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.81■□□□□ 0.6
EIF3FO00303 Z85996.1-201ENST00000494644 937 ntBASIC18.81■□□□□ 0.6
EIF3FO00303 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.81■□□□□ 0.6
EIF3FO00303 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
EIF3FO00303 AL135905.2-201ENST00000584934 1404 ntBASIC18.81■□□□□ 0.6
EIF3FO00303 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
EIF3FO00303 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EIF3FO00303 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
EIF3FO00303 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 KRT8P41-201ENST00000533985 1514 ntBASIC18.8■□□□□ 0.6
EIF3FO00303 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.8■□□□□ 0.6
EIF3FO00303 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EIF3FO00303 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 PRORSD1P-201ENST00000295112 541 ntBASIC18.8■□□□□ 0.6
EIF3FO00303 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.8■□□□□ 0.6
EIF3FO00303 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.8■□□□□ 0.6
EIF3FO00303 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.8■□□□□ 0.6
EIF3FO00303 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.8■□□□□ 0.6
EIF3FO00303 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.8■□□□□ 0.6
EIF3FO00303 FAM197Y4-202ENST00000622692 608 ntBASIC18.8■□□□□ 0.6
EIF3FO00303 FEM1AP3-201ENST00000403722 1741 ntBASIC18.8■□□□□ 0.6
EIF3FO00303 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EIF3FO00303 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 AC004980.1-204ENST00000429707 299 ntBASIC18.79■□□□□ 0.6
EIF3FO00303 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EIF3FO00303 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.79■□□□□ 0.6
EIF3FO00303 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.79■□□□□ 0.6
EIF3FO00303 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.79■□□□□ 0.6
EIF3FO00303 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms