Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 FSCN1P1-201ENST00000568912 1481 ntBASIC18.82■□□□□ 0.6
TAF4O00268 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TAF4O00268 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TAF4O00268 SMG8-203ENST00000578922 2178 ntBASIC18.82■□□□□ 0.6
TAF4O00268 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TAF4O00268 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TAF4O00268 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TAF4O00268 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TAF4O00268 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TAF4O00268 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TAF4O00268 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TAF4O00268 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TAF4O00268 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.81■□□□□ 0.6
TAF4O00268 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TAF4O00268 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TAF4O00268 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TAF4O00268 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.81■□□□□ 0.6
TAF4O00268 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TAF4O00268 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.81■□□□□ 0.6
TAF4O00268 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.81■□□□□ 0.6
TAF4O00268 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.81■□□□□ 0.6
TAF4O00268 AC092647.4-201ENST00000457211 535 ntBASIC18.81■□□□□ 0.6
TAF4O00268 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TAF4O00268 AC004263.2-201ENST00000617183 678 ntBASIC18.81■□□□□ 0.6
TAF4O00268 AL031985.4-201ENST00000642138 673 ntBASIC18.81■□□□□ 0.6
TAF4O00268 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TAF4O00268 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.81■□□□□ 0.6
TAF4O00268 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.81■□□□□ 0.6
TAF4O00268 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.81■□□□□ 0.6
TAF4O00268 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TAF4O00268 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TAF4O00268 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TAF4O00268 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TAF4O00268 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.8■□□□□ 0.6
TAF4O00268 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TAF4O00268 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.8■□□□□ 0.6
TAF4O00268 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TAF4O00268 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.8■□□□□ 0.6
TAF4O00268 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TAF4O00268 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.8■□□□□ 0.6
TAF4O00268 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.8■□□□□ 0.6
TAF4O00268 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TAF4O00268 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TAF4O00268 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TAF4O00268 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TAF4O00268 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TAF4O00268 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TAF4O00268 HMGA1P5-201ENST00000412453 271 ntBASIC18.79■□□□□ 0.6
TAF4O00268 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TAF4O00268 FDX1P1-201ENST00000449115 551 ntBASIC18.79■□□□□ 0.6
TAF4O00268 KRT18P16-201ENST00000510337 1294 ntBASIC18.79■□□□□ 0.6
TAF4O00268 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TAF4O00268 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.79■□□□□ 0.6
TAF4O00268 AC116407.4-201ENST00000623319 1061 ntBASIC18.79■□□□□ 0.6
TAF4O00268 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TAF4O00268 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TAF4O00268 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.79■□□□□ 0.6
TAF4O00268 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TAF4O00268 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TAF4O00268 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.79■□□□□ 0.6
TAF4O00268 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.78■□□□□ 0.6
TAF4O00268 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TAF4O00268 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.78■□□□□ 0.6
TAF4O00268 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TAF4O00268 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TAF4O00268 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TAF4O00268 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TAF4O00268 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TAF4O00268 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.78■□□□□ 0.6
TAF4O00268 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.78■□□□□ 0.6
TAF4O00268 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.78■□□□□ 0.6
TAF4O00268 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.78■□□□□ 0.6
TAF4O00268 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.78■□□□□ 0.6
TAF4O00268 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.78■□□□□ 0.6
TAF4O00268 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TAF4O00268 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TAF4O00268 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.78■□□□□ 0.6
TAF4O00268 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TAF4O00268 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.78■□□□□ 0.6
TAF4O00268 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TAF4O00268 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.78■□□□□ 0.6
TAF4O00268 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TAF4O00268 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.77■□□□□ 0.6
TAF4O00268 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TAF4O00268 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms