Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.82■□□□□ 0.12
A0A1W2PRF3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 NUDT16P1-203ENST00000513809 620 ntBASIC15.82■□□□□ 0.12
A0A1W2PRF3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 AL353708.3-201ENST00000610272 989 ntBASIC15.82■□□□□ 0.12
A0A1W2PRF3 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.82■□□□□ 0.12
A0A1W2PRF3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
A0A1W2PRF3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
A0A1W2PRF3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 REXO1L10P-201ENST00000615707 1290 ntBASIC15.81■□□□□ 0.12
A0A1W2PRF3 REXO1L12P-201ENST00000622156 912 ntBASIC15.81■□□□□ 0.12
A0A1W2PRF3 AC131212.4-201ENST00000623606 975 ntBASIC15.81■□□□□ 0.12
A0A1W2PRF3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
A0A1W2PRF3 AL031985.4-201ENST00000642138 673 ntBASIC15.81■□□□□ 0.12
A0A1W2PRF3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.81■□□□□ 0.12
A0A1W2PRF3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
A0A1W2PRF3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
A0A1W2PRF3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.8■□□□□ 0.12
A0A1W2PRF3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.8■□□□□ 0.12
A0A1W2PRF3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.8■□□□□ 0.12
A0A1W2PRF3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.8■□□□□ 0.12
A0A1W2PRF3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 BX088651.1-201ENST00000540551 451 ntBASIC15.8■□□□□ 0.12
A0A1W2PRF3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 AP000525.1-201ENST00000608286 694 ntBASIC15.8■□□□□ 0.12
A0A1W2PRF3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.8■□□□□ 0.12
A0A1W2PRF3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.8■□□□□ 0.12
A0A1W2PRF3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
A0A1W2PRF3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
A0A1W2PRF3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
A0A1W2PRF3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
A0A1W2PRF3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
A0A1W2PRF3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
A0A1W2PRF3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.79■□□□□ 0.12
A0A1W2PRF3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
A0A1W2PRF3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
A0A1W2PRF3 MIR1238-201ENST00000408483 83 ntBASIC15.79■□□□□ 0.12
A0A1W2PRF3 AL390955.1-201ENST00000428694 934 ntBASIC15.79■□□□□ 0.12
A0A1W2PRF3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.79■□□□□ 0.12
A0A1W2PRF3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
A0A1W2PRF3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
A0A1W2PRF3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
A0A1W2PRF3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms