Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 LINC01465-201ENST00000408887 1940 ntBASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 SOX15-203ENST00000570788 1093 ntBASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 AC083880.1-201ENST00000608266 535 ntBASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 AC133041.1-202ENST00000642053 222 ntBASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-3A0A0B4J271 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms