Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 CA15P1-201ENST00000481698 905 ntBASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 AC010653.2-201ENST00000623505 997 ntBASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV10A0A0B4J240 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 ARMC10P1-201ENST00000313754 855 ntBASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 LINC01238-205ENST00000567549 1107 ntBASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 AC007952.6-201ENST00000573168 2673 ntBASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 AC003957.1-201ENST00000625108 2673 ntBASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 AC073508.3-201ENST00000619697 1419 ntBASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV10A0A0B4J240 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 BX664615.1-201ENST00000443558 458 ntBASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 PRSS44-201ENST00000515154 1146 ntBASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 AC010203.1-204ENST00000548782 407 ntBASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 AL445228.2-201ENST00000605589 952 ntBASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 FAM87A-204ENST00000613235 858 ntBASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV10A0A0B4J240 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms